1.Module annotation (GSEA enrichment result) Function Annotation | FDR | Gene Ontolog | sphingolipid metabolic process, | 0.006186436 | GO:0006665 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, | 0.020405669 | GO:0016624 | glucosylceramidase activity, | 0.020405669 | GO:0004348 | Butanoate_metabolism | 0.037440852 | KEGG | Pyruvate_metabolism | 0.041933802 | KEGG | Citrate_cycle_(TCA_cycle) | 0.041933802 | KEGG | Glycolysis_/_Gluconeogenesis | 0.043765654 | KEGG | serine-type carboxypeptidase activity, | 0.049980059 | GO:0004185 | nucleotidyltransferase activity, | 0.049980059 | GO:0016779 |
2.Module member annotation Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | PH01000027G0920 | suppressor of abi3-5 | AT3G54230 (4.00E-180) | PH01000092G1150 | pyruvate dehydrogenase complex E1 alpha subunit | AT1G59900 (1.00E-168) | PH01000343G0840 | histone mono-ubiquitination 1 | AT2G44950 (2.10E-32) | PH01002395G0300 | SERINE CARBOXYPEPTIDASE-LIKE 49 | AT3G10410 (0.00E+00) | PH01003236G0080 | Nucleotidyltransferase family protein | AT4G00060 (5.00E-147) | PH01042610G0010 | Beta-glucosidase, GBA2 type family protein | AT3G24180 (2.00E-153) |
3.Direct connection functional modules Module ID | Function Annotation | Overlap condition | CFinderM000256 | signal recognition particle, proton-transporting two-sector ATPase complex, proton-transporting domain,
| details | CFinderM000837 | glutamyl-tRNA aminoacylation, guanosine tetraphosphate metabolic process, tRNA aminoacylation, Aminoacyl-tRNA_biosynthesis Porphyrin_and_chlorophyll_metabolism glutamate-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, tRNA binding, tRNA aminoacylation for protein translation,
| details | CFinderM001401 | Plant_hormone_signal_transduction bZIP Transcription_Regulator(from PlantTFDB)
| details | CFinderM001402 | phosphatidylinositol-mediated signaling, RNA 3'-end processing, RNA polyadenylation, phosphatidylinositol_biosynthetic_process phosphatidylinositol phosphorylation, 1-phosphatidylinositol_4-kinase_activity Inositol_phosphate_metabolism Phosphatidylinositol_signaling_system mRNA_surveillance_pathway polynucleotide adenylyltransferase activity,
| details | CFinderM001439 | CAMTA Transcription_Regulator(from PlantTFDB) sphingolipid metabolic process, glucosylceramidase activity, mannosyl-oligosaccharide 1,2-alpha-mannosidase activity,
| details | CFinderM001595 | dephosphorylation, Butanoate_metabolism Citrate_cycle_(TCA_cycle) Pyruvate_metabolism
| details | CFinderM001649 | CMGC_CDK-PITSLRE (from iTAK) LUG Transcription_Regulator(from iTAK) sphingolipid metabolic process, glucosylceramidase activity,
| details | CFinderM001675 | GT47 GlycosylTransferases dephosphorylation, Butanoate_metabolism oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, Pyruvate_metabolism Citrate_cycle_(TCA_cycle) Glycolysis_/_Gluconeogenesis
| details | CFinderM001679 | PHD Transcription_Regulator(from iTAK) oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, Butanoate_metabolism nucleotidyltransferase activity, serine-type carboxypeptidase activity, Pyruvate_metabolism Citrate_cycle_(TCA_cycle) Glycolysis_/_Gluconeogenesis
| details | CFinderM001830 | WASH_complex drug_binding oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, Butanoate_metabolism Pyruvate_metabolism Citrate_cycle_(TCA_cycle) Glycolysis_/_Gluconeogenesis
| details |
4.Expression profilings |