CFinderM001679's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
PHD Transcription_Regulator(from iTAK)0.008224126GFam
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,0.025671044GO:0016624
Butanoate_metabolism0.037440852KEGG
nucleotidyltransferase activity,0.041917772GO:0016779
serine-type carboxypeptidase activity,0.041917772GO:0004185
Pyruvate_metabolism0.041933802KEGG
Citrate_cycle_(TCA_cycle)0.041933802KEGG
Glycolysis_/_Gluconeogenesis0.043765654KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000006G3240PHD finger family proteinAT3G08020 (1.00E-153)
PH01000092G1150pyruvate dehydrogenase complex E1 alpha subunitAT1G59900 (1.00E-168)
PH01002395G0300SERINE CARBOXYPEPTIDASE-LIKE 49AT3G10410 (0.00E+00)
PH01002957G0150glycine-rich proteinAT4G17620 (4.00E-110)
PH01003236G0080Nucleotidyltransferase family proteinAT4G00060 (5.00E-147)
PH01004294G0040C2H2 zinc-finger protein SERRATE (SE)AT2G27100 (1.00E-171)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000201RLK-Pelle_CrRLK1L-1 (from iTAK)
5'-3' exoribonuclease activity,
nucleobase-containing compound metabolic process,
Ribosome_biogenesis_in_eukaryotes
RNA_degradation
details
CFinderM000256signal recognition particle,
proton-transporting two-sector ATPase complex, proton-transporting domain,
details
CFinderM000733TBP-class_protein_binding
positive_regulation_of_transcription,_DNA-templated
WASH_complex
outer membrane,
transcription initiation, DNA-dependent,
zinc ion binding,
details
CFinderM000898WASH_complex
cullin-RING ubiquitin ligase complex,
PHD Transcription_Regulator(from iTAK)
mitotic_spindle_assembly_checkpoint
ubiquitin protein ligase binding,
cysteine-type peptidase activity,
protein serine/threonine phosphatase activity,
details
CFinderM001242mitotic_spindle_assembly_checkpoint
WASH_complex
PHD Transcription_Regulator(from iTAK)
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
details
CFinderM001595dephosphorylation,
Butanoate_metabolism
Citrate_cycle_(TCA_cycle)
Pyruvate_metabolism
details
CFinderM001650sphingolipid metabolic process,
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
glucosylceramidase activity,
Butanoate_metabolism
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
serine-type carboxypeptidase activity,
nucleotidyltransferase activity,
details
CFinderM001674PHD Transcription_Regulator(from iTAK)
sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity,
pentose-phosphate shunt,
details
CFinderM001675GT47 GlycosylTransferases
dephosphorylation,
Butanoate_metabolism
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
details
CFinderM001830WASH_complex
drug_binding
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
Butanoate_metabolism
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
details

4.Expression profilings