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1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | mitochondrial proton-transporting ATP synthase complex, catalytic core F(1), | 0.007216945 | GO:0000275 | | Aminoacyl-tRNA_biosynthesis | 0.011014889 | KEGG | | ATP_catabolic_process | 0.019206039 | GO:0006200 | | valyl-tRNA aminoacylation, | 0.019206039 | GO:0006438 | | ATP biosynthetic process, | 0.019206039 | GO:0006754 | | ATP metabolic process, | 0.019206039 | GO:0046034 | | G-protein coupled receptor signaling pathway, | 0.020844125 | GO:0007186 | | G-protein_beta/gamma-subunit_complex_binding | 0.020933253 | GO:0031683 | | guanyl nucleotide binding, | 0.020933253 | GO:0019001 | | valine-tRNA ligase activity, | 0.020933253 | GO:0004832 | | aminoacyl-tRNA_editing_activity | 0.020933253 | GO:0002161 | | proton transport, | 0.021932614 | GO:0015992 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000143G0910 | glucan synthase-like 10 | AT3G07160 (2.80E-58) | | PH01000343G0240 | ubiquitin C-terminal hydrolase 3 | AT4G17510 (1.10E-78) | | PH01000469G0130 | valyl-tRNA synthetase / valine--tRNA ligase (VALRS) | AT1G14610 (2.00E-149) | | PH01001134G0580 | - | AT1G26750 (2.00E-08) | | PH01001513G0480 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT1G76280 (2.00E-172) | | PH01001693G0110 | G protein alpha subunit 1 | AT2G26300 (4.00E-134) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000885 | SNF2 Transcription_Regulator(from iTAK)
valyl-tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
valine-tRNA ligase activity,
protein binding,
aminoacyl-tRNA_editing_activity
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity,
tRNA aminoacylation for protein translation,
cellulose biosynthetic process,
| details | | CFinderM001066 | mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
vesicle docking,
ATP metabolic process,
ATP_catabolic_process
ATP biosynthetic process,
proton transport,
exocytosis,
| details | | CFinderM001483 | eukaryotic translation initiation factor 3 complex,
cytoplasm,
valyl-tRNA aminoacylation,
aminoacyl-tRNA_editing_activity
valine-tRNA ligase activity,
guanyl nucleotide binding,
G-protein_beta/gamma-subunit_complex_binding
G-protein coupled receptor signaling pathway,
Aminoacyl-tRNA_biosynthesis
| details | | CFinderM001596 | mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
malic enzyme activity,
malate_dehydrogenase_(decarboxylating)_(NAD+)_activity
ATP_catabolic_process
ATP biosynthetic process,
ATP metabolic process,
malate metabolic process,
proton transport,
Protein_processing_in_endoplasmic_reticulum
| details | | CFinderM001643 | protein targeting,
protein import,
GT31 GlycosylTransferases
Protein_export
| details | | CFinderM001791 | valyl-tRNA aminoacylation,
eukaryotic translation initiation factor 3 complex,
cytoplasm,
aminoacyl-tRNA_editing_activity
valine-tRNA ligase activity,
Aminoacyl-tRNA_biosynthesis
NAC Transcription_Regulator(from PlantTFDB)
tRNA aminoacylation for protein translation,
| details | | CFinderM001889 | GT66 GlycosylTransferases
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
oligosaccharyl transferase activity,
ATP_catabolic_process
ATP biosynthetic process,
ATP metabolic process,
proton transport,
Protein_processing_in_endoplasmic_reticulum
protein glycosylation,
| details |
4.Expression profilings |
