CFinderM001725's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
cellular protein metabolic process,0.016475985GO:0044267
MYB Transcription_Regulator(from PlantTFDB)0.048655606GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000159G0310phosphatidylinositol-4-phosphate 5-kinase family proteinAT3G14270 (0)
PH01000215G0700-AT5G65950 (0.00E+00)
PH01000276G1300RING/U-box superfamily proteinAT4G35840 (4.60E-58)
PH01000308G0750TOPLESS-related 1AT1G80490 (0)
PH01000318G0140Uncharacterised protein family (UPF0497)AT1G17200 (7.60E-54)
PH01000392G0510myb domain protein 12AT2G47460 (4.90E-62)
PH01000525G0700ubiquitin-conjugating enzyme 23AT2G16920 (0.00E+00)
PH01001238G0220TOPLESS-related 1AT1G80490 (0.00E+00)
PH01003003G0230Uncharacterised protein family (UPF0497)AT4G16442 (3.70E-46)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000185integral to membrane,
details
CFinderM000188ubiquitin-dependent protein catabolic process,
details
CFinderM000448COPII vesicle coat,
Protein_processing_in_endoplasmic_reticulum
Protein_export
details
CFinderM000449glycerol ether metabolic process,
cell redox homeostasis,
details
CFinderM000503details
CFinderM000535GT37 GlycosylTransferases
CMGC_MAPK (from iTAK)
details
CFinderM000611WNK_NRBP (from iTAK)
PHD Transcription_Regulator(from iTAK)
details
CFinderM000862DBP Transcription_Regulator(from iTAK)
Golgi stack,
GPI-anchor transamidase complex,
details
CFinderM000878Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
Phagosome
details
CFinderM001028peptide-methionine_(R)-S-oxide_reductase_activity
metallopeptidase activity,
Ubiquitin_mediated_proteolysis
acid-amino acid ligase activity,
details
CFinderM001087peroxiredoxin activity,
antioxidant activity,
Glutathione_metabolism
metallopeptidase activity,
details
CFinderM001091DBP Transcription_Regulator(from iTAK)
protein dephosphorylation,
nucleosome assembly,
details
CFinderM001170DBP Transcription_Regulator(from iTAK)
cellular protein metabolic process,
protein dephosphorylation,
Phosphatidylinositol_signaling_system
Inositol_phosphate_metabolism
Phagosome
details
CFinderM001270lipid metabolic process,
details
CFinderM001335clathrin coat of trans-Golgi network vesicle,
clathrin coat of coated pit,
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
WRKY Transcription_Regulator(from PlantTFDB)
Phagosome
details
CFinderM001590protein processing,
peroxiredoxin activity,
antioxidant activity,
integral to membrane,
Biosynthesis_of_unsaturated_fatty_acids
Fatty_acid_elongation
oxidoreductase activity, acting on the CH-CH group of donors,
double-stranded RNA binding,
ribonuclease III activity,
details
CFinderM001821protein processing,
mRNA_surveillance_pathway
protein binding,
details
CFinderM001822protein processing,
PHD Transcription_Regulator(from iTAK)
details
CFinderM001853peroxisome organization,
integral_component_of_peroxisomal_membrane
cullin-RING ubiquitin ligase complex,
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001857protein processing,
antioxidant activity,
peroxiredoxin activity,
details
CFinderM001893Golgi-associated vesicle,
Terpenoid_backbone_biosynthesis
membrane coat,
COPI vesicle coat,
isoprenoid biosynthetic process,
details

4.Expression profilings


Show details about module gene expression profiling