|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Protein_processing_in_endoplasmic_reticulum | 0.002080078 | KEGG | | U4/U6_x_U5_tri-snRNP_complex | 0.002812236 | GO:0046540 | | intracellular protein transport, | 0.004760048 | GO:0006886 | | GTP binding, | 0.006821806 | GO:0005525 | | intracellular, | 0.010977452 | GO:0005622 | | nuclear mRNA splicing, via spliceosome, | 0.016976844 | GO:0000398 | | small GTPase mediated signal transduction, | 0.041552028 | GO:0007264 |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000818 | SNF2 Transcription_Regulator(from iTAK)
GTP binding,
Protein_processing_in_endoplasmic_reticulum
intracellular protein transport,
| details | | CFinderM000834 | Ubiquitin_mediated_proteolysis
| details | | CFinderM000945 | Protein_processing_in_endoplasmic_reticulum
| details | | CFinderM000970 | Protein_processing_in_endoplasmic_reticulum
C3H Transcription_Regulator(from PlantTFDB)
RNA_transport
| details | | CFinderM001407 | threonine-type endopeptidase activity,
endopeptidase activity,
proteolysis involved in cellular protein catabolic process,
proteasome core complex,
Proteasome
RLK-Pelle_LRR-XIV (from iTAK)
Protein_processing_in_endoplasmic_reticulum
proteasome core complex, alpha-subunit complex,
Protein_export
| details | | CFinderM001411 | proton-transporting V-type ATPase, V0 domain,
proton-transporting two-sector ATPase complex, proton-transporting domain,
RNA metabolic process,
ATP hydrolysis coupled proton transport,
| details | | CFinderM001433 | positive_regulation_of_autophagy
rRNA_catabolic_process
proton-transporting V-type ATPase, V0 domain,
proton-transporting two-sector ATPase complex, proton-transporting domain,
ATP hydrolysis coupled proton transport,
ribonuclease III activity,
fructose-bisphosphate aldolase activity,
double-stranded RNA binding,
hydrogen ion transmembrane transporter activity,
glycolysis,
| details | | CFinderM001434 | Oxidative_phosphorylation
positive_regulation_of_autophagy
phosphate-containing compound metabolic process,
proton-transporting V-type ATPase, V0 domain,
proton-transporting two-sector ATPase complex, proton-transporting domain,
ATP hydrolysis coupled proton transport,
glycolysis,
fructose-bisphosphate aldolase activity,
inorganic diphosphatase activity,
hydrogen ion transmembrane transporter activity,
| details | | CFinderM001525 | MYB-related Transcription_Regulator(from iTAK)
| details | | CFinderM001606 | LIM Transcription_Regulator(from iTAK)
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
proton-transporting two-sector ATPase complex, catalytic domain,
proton-transporting ATP synthase complex, catalytic core F(1),
ATP biosynthetic process,
ATP metabolic process,
ATP_catabolic_process
actin cytoskeleton organization,
proton transport,
ATP synthesis coupled proton transport,
ATP hydrolysis coupled proton transport,
Phagosome
Oxidative_phosphorylation
| details | | CFinderM001638 | tRNA methylation,
tRNA (guanine-N1-)-methyltransferase activity,
proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
NAC Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001711 | intracellular protein transport,
binding,
| details | | CFinderM001785 | transferase activity, transferring pentosyl groups,
Nicotinate_and_nicotinamide_metabolism
Diterpenoid_biosynthesis
| details | | CFinderM001841 | proton-transporting V-type ATPase, V0 domain,
proton-transporting two-sector ATPase complex, proton-transporting domain,
| details | | CFinderM001883 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
tyrosine biosynthetic process,
prephenate dehydrogenase (NADP+) activity,
prephenate_dehydrogenase_activity
SNF2 Transcription_Regulator(from iTAK)
RNA_polymerase
| details |
4.Expression profilings |
