CFinderM001801's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
GH17 Glycoside_Hydrolases0.00505333GFam
phospholipid transport,0.039887002GO:0015914
phosphatidylinositol metabolic process,0.039887002GO:0046488
Inositol_phosphate_metabolism0.047967157KEGG
Phosphatidylinositol_signaling_system0.047967157KEGG
RNA_degradation0.047967157KEGG
Arginine_and_proline_metabolism0.047967157KEGG
Phagosome0.047967157KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000083G1160binding partner of acd11 1AT5G16840 (2.10E-51)
PH01000209G1050aminophospholipid ATPase 1AT5G04930 (0.00E+00)
PH01001235G0180RNA binding (RRM/RBD/RNP motifs) family proteinAT5G60170 (2.00E-108)
PH01001424G0230Glycosyl hydrolase superfamily proteinAT3G46570 (6.20E-83)
PH01002680G01601-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinasesAT4G33240 (0.00E+00)
PH01008882G00102-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteinAT5G18900 (2.00E-103)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000006CAMK_CDPK (from iTAK)
transporter activity,
transport,
transmembrane transport,
polygalacturonase activity,
details
CFinderM000238Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
Phagosome
Ribosome_biogenesis_in_eukaryotes
details
CFinderM000239cullin-RING ubiquitin ligase complex,
glycogen_phosphorylase_activity
protein_binding,_bridging
actin filament binding,
phosphatidylserine biosynthetic process,
details
CFinderM000817riboflavin synthase complex,
ubiquitin protein ligase binding,
cullin-RING ubiquitin ligase complex,
Riboflavin_metabolism
riboflavin biosynthetic process,
cellular amino acid biosynthetic process,
Nucleotide_excision_repair
details
CFinderM000911intracellular,
Ribosome
translation,
PHD Transcription_Regulator(from iTAK)
structural constituent of ribosome,
protein import into nucleus,
details
CFinderM000967TKL-Pl-1 (from iTAK)
GH17 Glycoside_Hydrolases
phosphate-containing compound metabolic process,
phospholipid transport,
magnesium ion binding,
details
CFinderM000973STE_STE11 (from iTAK)
protein import into nucleus,
RNA_degradation
phospholipid transport,
details
CFinderM001168cullin-RING ubiquitin ligase complex,
SNF2 Transcription_Regulator(from iTAK)
glycogen_phosphorylase_activity
Nucleotide_excision_repair
Ubiquitin_mediated_proteolysis
details
CFinderM001197Ribosome
translation,
G2-like Transcription_Regulator(from PlantTFDB)
GARP-G2-like Transcription_Regulator(from iTAK)
L-ascorbic acid binding,
structural constituent of ribosome,
Arginine_and_proline_metabolism
details
CFinderM001279cullin-RING ubiquitin ligase complex,
ubiquitin protein ligase binding,
Nucleotide_excision_repair
Ubiquitin_mediated_proteolysis
details
CFinderM001280GH17 Glycoside_Hydrolases
Arginine_and_proline_metabolism
phospholipid transport,
details
CFinderM001281phospholipid transport,
phosphatidylinositol metabolic process,
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
cellular protein metabolic process,
Phagosome
details
CFinderM001469FAR1 Transcription_Regulator(from PlantTFDB)
CMGC_CDK-CRK7-CDK9 (from iTAK)
RNA_degradation
membrane,
details
CFinderM001513Glycine,_serine_and_threonine_metabolism
GH17 Glycoside_Hydrolases
L-serine biosynthetic process,
phosphoglycerate dehydrogenase activity,
Methane_metabolism
cofactor binding,
details
CFinderM001568FAR1 Transcription_Regulator(from PlantTFDB)
RLK-Pelle_LRR-XV (from iTAK)
details
CFinderM001597Phosphatidylinositol_signaling_system
Inositol_phosphate_metabolism
phosphatidylinositol metabolic process,
phosphatidylinositol phosphate kinase activity,
Phagosome
cellular protein metabolic process,
C3H Transcription_Regulator(from PlantTFDB)
membrane,
details
CFinderM001656GH43 Glycoside_Hydrolases
TKL-Pl-6 (from iTAK)
GH35 Glycoside_Hydrolases
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
details
CFinderM001657Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
phosphatidylinositol metabolic process,
Phagosome
cellular protein metabolic process,
phosphatidylinositol phosphate kinase activity,
aspartic-type endopeptidase activity,
GH35 Glycoside_Hydrolases
phospholipid transport,
proteolysis,
metal ion binding,
details
CFinderM001658Phosphatidylinositol_signaling_system
Inositol_phosphate_metabolism
phosphatidylinositol metabolic process,
phosphatidylinositol phosphate kinase activity,
Phagosome
cellular protein metabolic process,
TKL-Pl-6 (from iTAK)
details
CFinderM001709GH17 Glycoside_Hydrolases
Arginine_and_proline_metabolism
details
CFinderM001751RLK-Pelle_LRR-II (from iTAK)
Arginine_and_proline_metabolism
ion transport,
phospholipid transport,
details
CFinderM001781RLK-Pelle_LRR-XV (from iTAK)
RNA_degradation
copper ion transport,
C3H Transcription_Regulator(from PlantTFDB)
copper-transporting_ATPase_activity
protein binding,
details
CFinderM001783RLK-Pelle_LRR-XV (from iTAK)
RNA_degradation
zinc ion binding,
details
CFinderM001808protein binding,
Peroxisome
RNA_degradation
Endocytosis
details
CFinderM001827ARID Transcription_Regulator(from iTAK)
GH17 Glycoside_Hydrolases
Arginine_and_proline_metabolism
ion transport,
details

4.Expression profilings