CFinderM001805's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Golgi vesicle transport,0.006184019GO:0048193
vesicle-mediated transport,0.032063984GO:0016192
Spliceosome0.035474674KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000238G0750associated molecule with the SH3 domain of STAM 3AT4G16144 (1.50E-96)
PH01001015G0430RNA-binding (RRM/RBD/RNP motifs) family proteinAT1G02840 (3.20E-60)
PH01001390G0320TLD-domain containing nucleolar proteinAT5G06260 (1.00E-144)
PH01002106G0290syntaxin of plants 61AT1G28490 (1.00E-54)
PH01003243G0030HIT-type Zinc finger family proteinAT5G37055 (1.40E-49)
PH01005933G0010decoyAT1G14620 (6.20E-61)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000341exosome_(RNase_complex)
COP9_signalosome
details
CFinderM000454DNA replication, synthesis of RNA primer,
DNA primase activity,
details
CFinderM000886Spliceosome
RNA_degradation
details
CFinderM000909Homologous_recombination
DNA_replication
Mismatch_repair
histone-lysine N-methyltransferase activity,
single-stranded DNA binding,
Golgi vesicle transport,
details
CFinderM001039acetyl-CoA carboxylase activity,
biotin_carboxylase_activity
Fatty_acid_biosynthesis
Propanoate_metabolism
Pyruvate_metabolism
cytokinesis
microtubule cytoskeleton organization,
ligase activity,
microtubule binding,
details
CFinderM001109RLK-Pelle_LRR-VI-2 (from iTAK)
regulation of Rab GTPase activity,
Spliceosome
details
CFinderM001171COPII_vesicle_coating
details
CFinderM001372Spliceosome
GT32 GlycosylTransferases
Golgi stack,
AGC_NDR (from iTAK)
GTnc GlycosylTransferases
thiol oxidase activity,
nucleotide binding,
snRNA_binding
details
CFinderM001373GTnc GlycosylTransferases
phospholipid transport,
cellular metabolic process,
cation transport,
details
CFinderM001610Sphingolipid_metabolism
alpha-Linolenic_acid_metabolism
carboxylic acid metabolic process,
catalytic activity,
carboxy-lyase activity,
details
CFinderM001814Spliceosome
nucleotide binding,
snRNA_binding
nuclear mRNA splicing, via spliceosome,
phospholipid transport,
phospholipid-translocating ATPase activity,
cation transport,
details

4.Expression profilings