|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000084 | cell wall macromolecule catabolic process,
chitin catabolic process,
WRKY Transcription_Regulator(from PlantTFDB)
defense response to fungus,
ammonium_transport
ammonium_transmembrane_transport
defense response to bacterium,
metabolic process,
chitinase activity,
| details | | CFinderM000188 | ubiquitin-dependent protein catabolic process,
| details | | CFinderM000845 | iron-sulfur cluster assembly,
| details | | CFinderM000914 | tetrapyrrole biosynthetic process,
glutamate-1-semialdehyde 2,1-aminomutase activity,
ubiquitin-dependent protein catabolic process,
| details | | CFinderM001008 | RLK-Pelle_LRR-Xa (from iTAK)
porphobilinogen synthase activity,
coproporphyrinogen oxidase activity,
tetrapyrrole biosynthetic process,
porphyrin-containing compound biosynthetic process,
Porphyrin_and_chlorophyll_metabolism
| details | | CFinderM001107 | clathrin coat of trans-Golgi network vesicle,
clathrin coat of coated pit,
structural molecule activity,
vesicle-mediated transport,
mitochondrial_respiratory_chain_complex_III
intracellular protein transport,
mitochondrial electron transport, ubiquinol to cytochrome c,
negative regulation of catalytic activity,
identical protein binding,
| details | | CFinderM001153 | translation,
Ribosome
structural constituent of ribosome,
alpha-amylase activity,
intracellular,
large ribosomal subunit,
rRNA binding,
cation binding,
| details | | CFinderM001314 | RLK-Pelle_LRR-I-1 (from iTAK)
Tryptophan_metabolism
Lysine_degradation
Citrate_cycle_(TCA_cycle)
oxoglutarate dehydrogenase (succinyl-transferring) activity,
thiamine pyrophosphate binding,
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
tricarboxylic acid cycle,
SRP-dependent cotranslational protein targeting to membrane,
| details | | CFinderM001342 | | details | | CFinderM001406 | chloroplast,
RNA processing,
| details | | CFinderM001509 | Fatty_acid_metabolism
alpha-Linolenic_acid_metabolism
Ribosome
nuclear pore,
fatty acid metabolic process,
translation,
DNA integration,
3-hydroxyacyl-CoA_dehydrogenase_activity
| details | | CFinderM001527 | PHD Transcription_Regulator(from iTAK)
guanyl-nucleotide exchange factor activity,
| details | | CFinderM001533 | RLK-Pelle_LRR-Xa (from iTAK)
cytochrome b6f complex,
Ubiquinone_and_other_terpenoid-quinone_biosynthesis
translation,
cation binding,
structural constituent of ribosome,
alpha-amylase activity,
large ribosomal subunit,
| details | | CFinderM001534 | DNA integration,
translation,
nuclear pore,
large ribosomal subunit,
glycerol ether metabolic process,
| details | | CFinderM001575 | protein methylation,
ubiquitin thiolesterase activity,
ubiquitin-dependent protein catabolic process,
methyltransferase activity,
| details | | CFinderM001580 | iron-sulfur cluster assembly,
RNA processing,
| details | | CFinderM001590 | protein processing,
peroxiredoxin activity,
antioxidant activity,
integral to membrane,
Biosynthesis_of_unsaturated_fatty_acids
Fatty_acid_elongation
oxidoreductase activity, acting on the CH-CH group of donors,
double-stranded RNA binding,
ribonuclease III activity,
| details | | CFinderM001676 | Spliceosome
| details | | CFinderM001838 | ubiquitin-dependent protein catabolic process,
ubiquitin thiolesterase activity,
| details | | CFinderM001876 | Spliceosome
| details |
4.Expression profilings |
