CFinderM001837's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Ribosome0.001819295KEGG
ribosome biogenesis,0.018984912GO:0042254
ribonucleoprotein complex,0.020037046GO:0030529
large ribosomal subunit,0.02999364GO:0015934

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000117G0850Ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinAT3G62870 (5.00E-112)
PH01000242G1240SPA (suppressor of phyA-105) protein familyAT2G46340 (1.00E-140)
PH01000455G0230Sec14p-like phosphatidylinositol transfer family proteinAT2G21520 (5.00E-159)
PH01000749G0490phosphoinositide bindingAT1G61690 (7.10E-77)
PH01001189G0100Telomerase activating protein Est1AT5G19400 (1.20E-97)
PH01001470G0090Ribosomal protein L22p/L17e family proteinAT1G67430 (2.70E-81)
PH01001947G0320TRAF-like superfamily proteinAT5G43560 (3.00E-134)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000599mRNA_cis_splicing,_via_spliceosome
nuclear_cap_binding_complex
RNA_cap_binding
hydro-lyase activity,
fatty acid biosynthetic process,
Biotin_metabolism
Fatty_acid_biosynthesis
details
CFinderM000779spliceosomal complex,
nuclear mRNA splicing, via spliceosome,
Spliceosome
details
CFinderM001468IWS1 Transcription_Regulator(from iTAK)
Biotin_metabolism
Fatty_acid_biosynthesis
details
CFinderM001570cis-Golgi network,
transcription factor TFIID complex,
Basal_transcription_factors
details
CFinderM001635Ribosome
translation,
Ribosome
intracellular,
C3H Transcription_Regulator(from PlantTFDB)
details
CFinderM001637protein binding,
small GTPase mediated signal transduction,
details
CFinderM001729mRNA_surveillance_pathway
CAMTA Transcription_Regulator(from PlantTFDB)
protein binding,
transferase activity, transferring acyl groups,
details
CFinderM001788protein folding,
protein catabolic process,
details
CFinderM001819SNF2 Transcription_Regulator(from iTAK)
cis-Golgi network,
mRNA_surveillance_pathway
details
CFinderM001879cis-Golgi network,
details

4.Expression profilings