CFinderM001844's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
PLATZ Transcription_Regulator(from iTAK)0.005622275GFam
TRAF Transcription_Regulator(from iTAK)0.010658977GFam
microtubule,0.018515853GO:0005874
protein complex,0.018515853GO:0043234
Plant_hormone_signal_transduction0.043905446KEGG
Phagosome0.043905446KEGG
protein polymerization,0.049487824GO:0051258
microtubule-based process,0.049487824GO:0007017

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000027G1390NPR1-like protein 3AT5G45110 (1.00E-149)
PH01000101G0880alpha-1 tubulinAT1G64740 (0.00E+00)
PH01000659G0750-- (-)
PH01001117G0100PSF2AT3G12530 (2.30E-77)
PH01001250G0020PLATZ transcription factor family proteinAT1G32700 (3.50E-79)
PH01001260G0140fatty acid hydroxylase 1AT2G34770 (8.00E-107)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM001030protein import into mitochondrial inner membrane,
RLK-Pelle_L-LEC (from iTAK)
protein methylation,
details
CFinderM001083MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
Pseudo ARR-B Transcription_Regulator(from iTAK)
protein import into mitochondrial inner membrane,
transcription, DNA-dependent,
nucleus,
IWS1 Transcription_Regulator(from iTAK)
GNAT Transcription_Regulator(from iTAK)
details
CFinderM001214PLATZ Transcription_Regulator(from iTAK)
RLK-Pelle_LRR-VII-2 (from iTAK)
protein complex,
microtubule,
microtubule-based process,
translational initiation,
protein polymerization,
RLK-Pelle_DLSV (from iTAK)
Phagosome
RNA_transport
details
CFinderM001226protein complex,
microtubule,
translational initiation,
microtubule-based process,
protein polymerization,
GTP_catabolic_process
Phagosome
RNA_transport
details
CFinderM001545regulation of Rab GTPase activity,
PLATZ Transcription_Regulator(from iTAK)
details
CFinderM001721STE_STE11 (from iTAK)
outer membrane,
Endocytosis
details
CFinderM001833CMGC_GSK (from iTAK)
PLATZ Transcription_Regulator(from iTAK)
nucleosome,
nucleosome assembly,
details
CFinderM001843Valine,_leucine_and_isoleucine_degradation
Valine,_leucine_and_isoleucine_biosynthesis
PLATZ Transcription_Regulator(from iTAK)
protein complex,
microtubule,
TRAF Transcription_Regulator(from iTAK)
branched chain family amino acid metabolic process,
branched-chain-amino-acid transaminase activity,
protein polymerization,
translational initiation,
microtubule-based process,
Pantothenate_and_CoA_biosynthesis
structural constituent of cytoskeleton,
details
CFinderM001845protein complex,
microtubule,
PLATZ Transcription_Regulator(from iTAK)
Phagosome
mRNA_surveillance_pathway
CAMK_CAMKL-CHK1 (from iTAK)
protein polymerization,
microtubule-based process,
dephosphorylation,
details

4.Expression profilings