|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Various_types_of_N-glycan_biosynthesis | 2.37E-07 | KEGG | | N-Glycan_biosynthesis | 3.36E-07 | KEGG | | Protein_processing_in_endoplasmic_reticulum | 1.78E-05 | KEGG | | dolichyl-diphosphooligosaccharide-protein glycotransferase activity, | 7.80E-05 | GO:0004579 | | GT66 GlycosylTransferases | 0.000562535 | GFam | | protein glycosylation, | 0.000691844 | GO:0006486 | | protein N-linked glycosylation via asparagine, | 0.003124463 | GO:0018279 | | phenylalanyl-tRNA aminoacylation, | 0.003124463 | GO:0006432 | | tRNA aminoacylation, | 0.00974946 | GO:0043039 | | phenylalanine-tRNA ligase activity, | 0.010981742 | GO:0004826 | | oligosaccharyl transferase activity, | 0.010981742 | GO:0004576 | | tRNA binding, | 0.016464892 | GO:0000049 | | ER_membrane_protein_complex | 0.016534656 | GO:0072546 | | Aminoacyl-tRNA_biosynthesis | 0.022947685 | KEGG | | endoplasmic reticulum membrane, | 0.03027566 | GO:0005789 | | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, | 0.045993756 | GO:0016818 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000006G2790 | tRNA synthetase beta subunit family protein | AT1G72550 (0.00E+00) | | PH01000087G0720 | staurosporin and temperature sensitive 3-like b | AT1G34130 (0.00E+00) | | PH01000370G1030 | Ribophorin I | AT1G76400 (0.00E+00) | | PH01000448G0700 | RNA helicase, ATP-dependent, SK12/DOB1 protein | AT1G59760 (7.00E-177) | | PH01003544G0090 | catalytics | AT5G11560 (0.00E+00) | | PH01004676G0030 | dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein | AT5G66680 (2.00E-169) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000139 | metabolic process,
transferase activity, transferring hexosyl groups,
cysteine metabolic process,
phenylalanyl-tRNA aminoacylation,
cysteine desulfurase activity,
phenylalanine-tRNA ligase activity,
| details | | CFinderM000330 | GT96 GlycosylTransferases
ER_membrane_protein_complex
| details | | CFinderM000520 | ER_membrane_protein_complex
GT96 GlycosylTransferases
TKL-Pl-4 (from iTAK)
| details | | CFinderM000748 | protein glycosylation,
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
GT66 GlycosylTransferases
Protein_processing_in_endoplasmic_reticulum
Regulation_of_autophagy
oligosaccharyl transferase activity,
dolichyl-diphosphooligosaccharide-protein glycotransferase activity,
| details | | CFinderM000749 | Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
protein glycosylation,
GT66 GlycosylTransferases
Protein_processing_in_endoplasmic_reticulum
oligosaccharyl transferase activity,
dolichyl-diphosphooligosaccharide-protein glycotransferase activity,
response to stress,
| details | | CFinderM000835 | phenylalanyl-tRNA aminoacylation,
aminoacyl-tRNA ligase activity,
phenylalanine-tRNA ligase activity,
tRNA binding,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
nucleotide binding,
magnesium ion binding,
cytoplasm,
GeBP Transcription_Regulator(from PlantTFDB)
RNA binding,
tRNA aminoacylation for protein translation,
ATP binding,
| details | | CFinderM000848 | GT66 GlycosylTransferases
phenylalanyl-tRNA aminoacylation,
tRNA aminoacylation,
oligosaccharyl transferase activity,
phenylalanine-tRNA ligase activity,
tRNA binding,
protein glycosylation,
Various_types_of_N-glycan_biosynthesis
Aminoacyl-tRNA_biosynthesis
N-Glycan_biosynthesis
| details | | CFinderM000941 | defense_response_signaling_pathway,_resistance_gene-dependent
phenylalanyl-tRNA aminoacylation,
defense response to bacterium,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
phenylalanine-tRNA ligase activity,
tRNA binding,
| details | | CFinderM001257 | oligosaccharyl transferase activity,
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
protein glycosylation,
Protein_processing_in_endoplasmic_reticulum
GT66 GlycosylTransferases
membrane,
| details | | CFinderM001321 | GT66 GlycosylTransferases
peroxisome_fission
phenylalanyl-tRNA aminoacylation,
integral_component_of_peroxisomal_membrane
SAGA-type_complex
tRNA aminoacylation,
oligosaccharyl transferase activity,
phenylalanine-tRNA ligase activity,
| details | | CFinderM001647 | phenylalanyl-tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
tRNA binding,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
aminoacyl-tRNA ligase activity,
fumarate metabolic process,
nucleotide binding,
magnesium ion binding,
tricarboxylic acid cycle enzyme complex,
fumarate hydratase activity,
cytoplasm,
mitochondrial outer membrane,
RNA binding,
tricarboxylic acid cycle,
Carbon_fixation_pathways_in_prokaryotes
Citrate_cycle_(TCA_cycle)
lyase activity,
| details | | CFinderM001696 | phenylalanyl-tRNA aminoacylation,
microtubule,
mitochondrial outer membrane,
protein complex,
Fatty_acid_metabolism
Peroxisome
Aminoacyl-tRNA_biosynthesis
phenylalanine-tRNA ligase activity,
tRNA aminoacylation,
protein polymerization,
microtubule-based process,
tRNA binding,
| details | | CFinderM001793 | cysteine desulfurase activity,
cysteine metabolic process,
6-phosphofructokinase complex,
fructose_6-phosphate_metabolic_process
Sulfur_relay_system
Thiamine_metabolism
6-phosphofructokinase activity,
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides,
Galactose_metabolism
Fructose_and_mannose_metabolism
Pentose_phosphate_pathway
| details | | CFinderM001895 | phenylalanyl-tRNA aminoacylation,
mitochondrial outer membrane,
Aminoacyl-tRNA_biosynthesis
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
tRNA binding,
| details |
4.Expression profilings |
