CFinderM001864's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
GH63 Glycoside_Hydrolases0.000375053GFam
oligosaccharide metabolic process,0.006249902GO:0009311
mannosyl-oligosaccharide glucosidase activity,0.011024827GO:0004573
oxygen evolving complex,0.020256706GO:0009654
photosystem II,0.020256706GO:0009523
extrinsic to membrane,0.020256706GO:0019898
Photosynthesis0.049765366KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000002G1150glucosidase 1AT1G67490 (0.00E+00)
PH01000825G0440Photosystem II reaction center PsbP family proteinAT2G28605 (6.00E-55)
PH01001653G0150BolA-like family proteinAT5G17560 (1.70E-32)
PH01001692G0300trigalactosyldiacylglycerol 1AT1G19800 (9.30E-92)
PH01001810G0170alpha/beta-Hydrolases superfamily proteinAT5G06570 (1.10E-79)
PH01006233G0050Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domainAT2G32415 (2.00E-160)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000202peroxiredoxin activity,
antioxidant activity,
RNA_degradation
GRAS Transcription_Regulator(from PlantTFDB)
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
details
CFinderM000355OFP Transcription_Regulator(from iTAK)
electron transport chain,
RNA_degradation
Photosynthesis
details
CFinderM000357RNA_degradation
steroid biosynthetic process,
S-adenosylmethionine-dependent methyltransferase activity,
details
CFinderM000509Whirly Transcription_Regulator(from PlantTFDB)
protochlorophyllide reductase activity,
Photosynthesis
Porphyrin_and_chlorophyll_metabolism
photosystem II,
oxygen evolving complex,
RNA_degradation
details
CFinderM000510Porphyrin_and_chlorophyll_metabolism
protochlorophyllide reductase activity,
glutamate-1-semialdehyde 2,1-aminomutase activity,
tetrapyrrole biosynthetic process,
sodium ion transport,
RNA_degradation
details
CFinderM000700GH63 Glycoside_Hydrolases
RLK-Pelle_RLCK-XIII (from iTAK)
oligosaccharide metabolic process,
ubiquinone biosynthetic process,
tRNA methylation,
tRNA (guanine-N1-)-methyltransferase activity,
mannosyl-oligosaccharide glucosidase activity,
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen,
monooxygenase activity,
details
CFinderM000775Ribosome
iron_ion_transmembrane_transport
translation,
iron ion transmembrane transporter activity,
structural constituent of ribosome,
intracellular,
RNA_degradation
details
CFinderM000982RNA_degradation
folic acid-containing compound biosynthetic process,
methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity
cullin-RING ubiquitin ligase complex,
details
CFinderM000997oligosaccharide metabolic process,
GH63 Glycoside_Hydrolases
cell wall,
cell wall modification,
mannosyl-oligosaccharide glucosidase activity,
CE8 Carbohydrate_Esterases
N-Glycan_biosynthesis
details
CFinderM001222aminoacylase activity,
RNA_degradation
details
CFinderM001489Steroid_hormone_biosynthesis
Fatty_acid_elongation
Biosynthesis_of_unsaturated_fatty_acids
RNA_degradation
details
CFinderM001576RNA_degradation
photosystem II,
extrinsic to membrane,
oxygen evolving complex,
details
CFinderM001676Spliceosome
details
CFinderM001691Spliceosome
Rab GTPase activator activity,
details
CFinderM001813GT48 GlycosylTransferases
mitochondrial respiratory chain complex IV,
mitochondrial inner membrane,
1,3-beta-D-glucan synthase complex,
S-adenosylmethionine-dependent methyltransferase activity,
cytochrome-c oxidase activity,
steroid biosynthetic process,
(1->3)-beta-D-glucan biosynthetic process,
metabolic process,
RNA_degradation
Oxidative_phosphorylation
cellular metabolic process,
details
CFinderM001876Spliceosome
details

4.Expression profilings