miRNA detailed information
miRNA detail image
Location informaition
| Type | ID | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| mature | cro-novel-100 | scaffold_3056285 | 71793 | 71816 | + |
| precursor | cro-NOVEL-100 | scaffold_3056285 | 71715 | 71832 | + |
Sequence and structure information
Mature sequence[cro-novel-100] AGACUGCUCUGAUAUCAUGUUAGA | |
Stem-loop sequence[cro-NOVEL-100] UUUAAGGAUAAGAUAAUUUUAAAUGAUAUAGGAGGAUGUUAAAAUUUUUGGGCUUGGGUCUCAACACACUCCCGAAUUAGACUGCUCUGAUAUCAUGUUAGAAUUUUUUGGCUUUAGG | |
Secondary structure of stem-loop sequence 
To make high resolution picture for your own, please download the .ps file. |
miRNA target information
| Target gene | Alignment | Annotation | Expection | Method | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRO_T007775 |
| hypothetical protein | 2.5 | psRNATarget[Detail] |
Expression pattern
| Tissue | Treat | FPKM value |
|---|---|---|
| seedling | control | 79.8 |
| seedling | MeJA treatment 1h | 62.33 |
| seedling | MeJA treatment 8h | 62.2 |
| seedling | MeJA treatment 24h | 64.73 |