miRNA annotation pages

miRNA list

The microRNA sequences of C. roseus are integrated from the paper (PMID:28223695) and located by GMAP tools. In total, 223 miRNA sequences are located and 4 miRNA sequences are not located.

miRNA	Scaffold	Start	End	Strand	Method
cro-miR1511	scaffold_3053372	4617	4637	+	computational prediction
cro-miR156-1	scaffold_3019819	8196	8216	+	computational prediction
cro-miR156-2	scaffold_3068177	7988	7967	-	computational prediction
cro-miR157	scaffold_3068332	5886	5907	+	computational prediction
cro-miR159a	scaffold_3041204	39922	39902	-	computational prediction
cro-miR160-1	scaffold_3016285	2736	2714	-	computational prediction
cro-miR160g	scaffold_3051564	5313	5333	+	computational prediction
cro-miR162-1	scaffold_3001524	26411	26432	+	computational prediction
cro-miR162a-5p	scaffold_3001524	26432	26411	-	computational prediction
cro-miR164e-5p	scaffold_3054985	13770	13750	-	computational prediction
cro-miR164-2	scaffold_3049961	14406	14426	+	computational prediction
cro-miR166-1	scaffold_3038334	13004	12984	-	computational prediction
cro-miR166	scaffold_3051709	45296	45317	+	computational prediction
cro-miR166-3	scaffold_2997365	8484	8464	-	computational prediction
cro-miR167-1	scaffold_2914716	8839	8816	-	computational prediction
cro-miR167-2	scaffold_3038662	3931	3953	+	computational prediction
cro-miR168	scaffold_3011104	8153	8176	+	computational prediction
cro-miR171c	scaffold_3043744	6278	6258	-	computational prediction
cro-miR171-2	scaffold_3058276	20942	20922	-	computational prediction
cro-miR171-3	scaffold_3064339	41709	41689	-	computational prediction
cro-miR171a	scaffold_3070669	32764	32784	+	computational prediction
cro-miR172-1	scaffold_2979766	3529	3551	+	computational prediction
cro-miR172-2	scaffold_3059922	35561	35583	+	computational prediction
cro-miR2111	scaffold_3050860	24532	24512	-	computational prediction
cro-miR2275	scaffold_3008940	14613	14592	-	computational prediction
cro-miR319-1	scaffold_3003465	45330	45350	+	computational prediction
cro-miR319-2	scaffold_3014220	7178	7158	-	computational prediction
cro-miR319-3	scaffold_3026979	958	939	-	computational prediction
cro-miR319-5	scaffold_2975894	59418	59398	-	computational prediction
cro-miR390-1	scaffold_3060355	3952	3932	-	computational prediction
cro-miR390-2	scaffold_1136375	1913	1893	-	computational prediction
cro-miR390-3	scaffold_1136375	1913	1893	-	computational prediction
cro-miR393a-5p	scaffold_3060887	57323	57302	-	computational prediction
cro-miR394	scaffold_3052341	24606	24627	+	computational prediction
cro-miR395-1	scaffold_2989192	41177	41156	-	computational prediction
cro-miR395-2	scaffold_2989192	43540	43561	+	computational prediction
cro-miR395-3	scaffold_2989192	51779	51758	-	computational prediction
cro-miR395-4	scaffold_2989192	53305	53326	+	computational prediction
cro-miR396a-5p	scaffold_3056619	16207	16227	+	computational prediction
cro-miR396b-5p	scaffold_3066394	1402	1382	-	computational prediction
cro-miR396-3	scaffold_3070136	649	669	+	computational prediction
cro-miR397	scaffold_2989916	34619	34639	+	computational prediction
cro-miR398a-3p	scaffold_2976638	11105	11085	-	computational prediction
cro-miR399-1	scaffold_2957688	9446	9426	-	computational prediction
cro-miR399-2	scaffold_3052172	6304	6324	+	computational prediction
cro-miR399-3	scaffold_3019923	484	504	+	computational prediction
cro-miR399-4	scaffold_3042425	36837	36817	-	computational prediction
cro-miR399-5	scaffold_3059311	3146	3126	-	computational prediction
cro-miR399-6	scaffold_3070280	1849	1868	+	computational prediction
cro-miR399-7	scaffold_2957688	9446	9426	-	computational prediction
cro-miR408	scaffold_3057192	12483	12462	-	computational prediction
cro-miR477b	scaffold_3047120	13511	13531	+	computational prediction
cro-miR5532	scaffold_3065629	304	283	-	computational prediction
cro-miR8016	scaffold_3068655	3564	3587	+	computational prediction
cro-novel-38	scaffold_3059518	13163	13183	+	Experimental confirmed
cro-novel-43	scaffold_3052943	11038	11058	+	Experimental confirmed
cro-novel-58	scaffold_3063747	77008	76988	-	Experimental confirmed
cro-novel-71	scaffold_2962320	16584	16604	+	Experimental confirmed
cro-novel-88	scaffold_2983122	8017	7998	-	Experimental confirmed
cro-novel-92	scaffold_2965399	30777	30800	+	Experimental confirmed
cro-novel-98	scaffold_3041570	10850	10870	+	Experimental confirmed
cro-novel-1	scaffold_3067231	17717	17740	+	computational prediction
cro-novel-10	scaffold_3065645	14035	14058	+	computational prediction
cro-novel-100	scaffold_3056285	71793	71816	+	computational prediction
cro-novel-101	scaffold_3013495	8416	8439	+	computational prediction
cro-novel-102	scaffold_3062948	55353	55330	-	computational prediction
cro-novel-103	scaffold_3019032	12347	12370	+	computational prediction
cro-novel-104	scaffold_3039118	23089	23066	-	computational prediction
cro-novel-105	scaffold_3069335	12498	12521	+	computational prediction
cro-novel-106	scaffold_2978935	20661	20684	+	computational prediction
cro-novel-107	scaffold_3044054	5339	5320	-	computational prediction
cro-novel-108	scaffold_3060725	46883	46906	+	computational prediction
cro-novel-109	scaffold_2987893	54054	54031	-	computational prediction
cro-novel-11	scaffold_2982374	1413	1390	-	computational prediction
cro-novel-110	scaffold_3041332	22301	22278	-	computational prediction
cro-novel-111	scaffold_3058477	28567	28590	+	computational prediction
cro-novel-112	scaffold_3061966	42173	42150	-	computational prediction
cro-novel-113	scaffold_3068374	20993	20970	-	computational prediction
cro-novel-114	scaffold_3063558	7992	7969	-	computational prediction
cro-novel-116	scaffold_3061614	13557	13580	+	computational prediction
cro-novel-117	scaffold_3061425	6555	6532	-	computational prediction
cro-novel-118	scaffold_3018086	4751	4769	+	computational prediction
cro-novel-119	scaffold_2980235	62116	62139	+	computational prediction
cro-novel-12	scaffold_3059733	6832	6813	-	computational prediction
cro-novel-120	scaffold_2991604	2464	2487	+	computational prediction
cro-novel-121	scaffold_3033859	10079	10056	-	computational prediction
cro-novel-122	scaffold_3064978	40964	40941	-	computational prediction
cro-novel-123	scaffold_3066519	40362	40339	-	computational prediction
cro-novel-124	scaffold_3051266	1897	1920	+	computational prediction
cro-novel-125	scaffold_3070776	1575	1552	-	computational prediction
cro-novel-126	scaffold_3058488	39233	39256	+	computational prediction
cro-novel-127	scaffold_2985044	2038	2061	+	computational prediction
cro-novel-128	scaffold_3059723	16074	16052	-	computational prediction
cro-novel-129	scaffold_3055304	58484	58461	-	computational prediction
cro-novel-13	scaffold_3069926	64229	64252	+	computational prediction
cro-novel-130	scaffold_3052366	3943	3920	-	computational prediction
cro-novel-131	scaffold_3070821	34542	34519	-	computational prediction
cro-novel-132	scaffold_3017576	3411	3388	-	computational prediction
cro-novel-133	scaffold_189026	93	70	-	computational prediction
cro-novel-134	scaffold_3049935	7926	7903	-	computational prediction
cro-novel-135	scaffold_3020645	3596	3619	+	computational prediction
cro-novel-136	scaffold_3065291	13812	13790	-	computational prediction
cro-novel-137	scaffold_3064269	8070	8047	-	computational prediction
cro-novel-138	scaffold_3021587	8445	8422	-	computational prediction
cro-novel-139	scaffold_2977171	88	109	+	computational prediction
cro-novel-14	scaffold_3065891	8283	8263	-	computational prediction
cro-novel-140	scaffold_3058994	6565	6542	-	computational prediction
cro-novel-141	scaffold_3037706	6264	6287	+	computational prediction
cro-novel-142	scaffold_3069972	51162	51142	-	computational prediction
cro-novel-143	scaffold_2970316	29841	29864	+	computational prediction
cro-novel-144	scaffold_3070129	25097	25074	-	computational prediction
cro-novel-145	scaffold_2953778	16568	16591	+	computational prediction
cro-novel-146	scaffold_2962051	7209	7186	-	computational prediction
cro-novel-147	scaffold_2953968	52647	52624	-	computational prediction
cro-novel-148	scaffold_2964668	1394	1371	-	computational prediction
cro-novel-149	scaffold_2974547	17632	17655	+	computational prediction
cro-novel-15	scaffold_3058938	4659	4636	-	computational prediction
cro-novel-150	scaffold_3029210	12600	12623	+	computational prediction
cro-novel-151	scaffold_3063411	1397	1374	-	computational prediction
cro-novel-153	scaffold_2957962	7096	7119	+	computational prediction
cro-novel-154	scaffold_3069625	33437	33460	+	computational prediction
cro-novel-155	scaffold_3000226	12034	12057	+	computational prediction
cro-novel-156	scaffold_3038264	38457	38480	+	computational prediction
cro-novel-157	scaffold_3053895	634	655	+	computational prediction
cro-novel-158	scaffold_3053406	3499	3522	+	computational prediction
cro-novel-159	scaffold_3062668	15405	15383	-	computational prediction
cro-novel-16	scaffold_3037942	15532	15555	+	computational prediction
cro-novel-160	scaffold_3065910	18706	18727	+	computational prediction
cro-novel-161	scaffold_3065256	44230	44207	-	computational prediction
cro-novel-162	scaffold_3062420	12906	12883	-	computational prediction
cro-novel-163	scaffold_3069441	33953	33976	+	computational prediction
cro-novel-164	scaffold_3046947	2696	2719	+	computational prediction
cro-novel-165	scaffold_3059411	25464	25441	-	computational prediction
cro-novel-166	scaffold_2997159	210	233	+	computational prediction
cro-novel-167	scaffold_3061894	31040	31063	+	computational prediction
cro-novel-168	scaffold_3055708	23220	23243	+	computational prediction
cro-novel-169	scaffold_2997457	4658	4681	+	computational prediction
cro-novel-17	scaffold_3026526	6311	6334	+	computational prediction
cro-novel-170	scaffold_3070265	67309	67332	+	computational prediction
cro-novel-171	scaffold_3058407	3449	3472	+	computational prediction
cro-novel-172	scaffold_3061314	5792	5769	-	computational prediction
cro-novel-173	scaffold_3060615	58891	58914	+	computational prediction
cro-novel-18	scaffold_3070806	27050	27073	+	computational prediction
cro-novel-19	scaffold_3057035	22992	22969	-	computational prediction
cro-novel-2	scaffold_3064174	26564	26585	+	computational prediction
cro-novel-20	scaffold_2968350	13136	13159	+	computational prediction
cro-novel-21	scaffold_3027563	7121	7144	+	computational prediction
cro-novel-22	scaffold_3053446	12737	12717	-	computational prediction
cro-novel-23	scaffold_3056833	59188	59211	+	computational prediction
cro-novel-24	scaffold_2977869	2065	2088	+	computational prediction
cro-novel-25	scaffold_3018783	20596	20619	+	computational prediction
cro-novel-26	scaffold_3069540	27371	27394	+	computational prediction
cro-novel-27	scaffold_3068272	19637	19614	-	computational prediction
cro-novel-28	scaffold_3068885	10275	10298	+	computational prediction
cro-novel-29	scaffold_3046411	8024	8004	-	computational prediction
cro-novel-3	scaffold_3064732	5766	5744	-	computational prediction
cro-novel-30	scaffold_3000017	5431	5408	-	computational prediction
cro-novel-31	scaffold_3063946	51281	51258	-	computational prediction
cro-novel-32	scaffold_2957170	15675	15698	+	computational prediction
cro-novel-33	scaffold_3066551	5065	5085	+	computational prediction
cro-novel-34	scaffold_3049400	11116	11096	-	computational prediction
cro-novel-35	scaffold_2999703	18568	18591	+	computational prediction
cro-novel-36	scaffold_3020073	9263	9286	+	computational prediction
cro-novel-37	scaffold_3054625	11746	11769	+	computational prediction
cro-novel-39	scaffold_2983184	38274	38251	-	computational prediction
cro-novel-40	scaffold_3060615	62196	62219	+	computational prediction
cro-novel-41	scaffold_2921989	5003	4983	-	computational prediction
cro-novel-42	scaffold_3060104	3351	3328	-	computational prediction
cro-novel-44	scaffold_2978040	52801	52782	-	computational prediction
cro-novel-45	scaffold_3044342	10378	10401	+	computational prediction
cro-novel-46	scaffold_3038029	33705	33682	-	computational prediction
cro-novel-47	scaffold_2955814	2500	2523	+	computational prediction
cro-novel-48	scaffold_3068265	9861	9884	+	computational prediction
cro-novel-49	scaffold_3070158	15748	15771	+	computational prediction
cro-novel-50	scaffold_3070383	7807	7830	+	computational prediction
cro-novel-51	scaffold_3057438	16455	16434	-	computational prediction
cro-novel-52	scaffold_3051709	46074	46094	+	computational prediction
cro-novel-53	scaffold_3039845	6403	6426	+	computational prediction
cro-novel-54	scaffold_3057939	88852	88872	+	computational prediction
cro-novel-55	scaffold_2968450	19400	19420	+	computational prediction
cro-novel-56	scaffold_3059977	48514	48537	+	computational prediction
cro-novel-57	scaffold_3053500	4663	4640	-	computational prediction
cro-novel-59	scaffold_3062714	27674	27651	-	computational prediction
cro-novel-6	scaffold_3059929	19205	19182	-	computational prediction
cro-novel-60	scaffold_3069317	7168	7148	-	computational prediction
cro-novel-61	scaffold_3069164	19793	19816	+	computational prediction
cro-novel-62	scaffold_3061729	39000	39023	+	computational prediction
cro-novel-63	scaffold_3064339	48099	48076	-	computational prediction
cro-novel-64	scaffold_3053952	528	505	-	computational prediction
cro-novel-65	scaffold_3002661	12021	12044	+	computational prediction
cro-novel-66	scaffold_3019569	7445	7465	+	computational prediction
cro-novel-67	scaffold_3040850	13510	13533	+	computational prediction
cro-novel-68	scaffold_3042989	1866	1889	+	computational prediction
cro-novel-69	scaffold_2991814	20206	20185	-	computational prediction
cro-novel-7	scaffold_3028620	6235	6212	-	computational prediction
cro-novel-70	scaffold_2975709	3561	3584	+	computational prediction
cro-novel-72	scaffold_2956010	12529	12550	+	computational prediction
cro-novel-73	scaffold_3068533	40841	40862	+	computational prediction
cro-novel-74	scaffold_3025104	19073	19096	+	computational prediction
cro-novel-75	scaffold_3063775	5067	5044	-	computational prediction
cro-novel-76	scaffold_2989916	34687	34707	+	computational prediction
cro-novel-77	scaffold_3059409	11914	11937	+	computational prediction
cro-novel-78	scaffold_140938	5073	5051	-	computational prediction
cro-novel-79	scaffold_3005365	10439	10459	+	computational prediction
cro-novel-8	scaffold_3045169	5703	5680	-	computational prediction
cro-novel-80	scaffold_3057159	20713	20736	+	computational prediction
cro-novel-81	scaffold_2992312	6334	6357	+	computational prediction
cro-novel-82	scaffold_3044525	17988	18011	+	computational prediction
cro-novel-83	scaffold_3014870	3723	3700	-	computational prediction
cro-novel-84	scaffold_3057396	7593	7570	-	computational prediction
cro-novel-85	scaffold_2969135	17507	17484	-	computational prediction
cro-novel-86	scaffold_3068717	9469	9446	-	computational prediction
cro-novel-87	scaffold_3065538	30162	30185	+	computational prediction
cro-novel-89	scaffold_3065336	6516	6539	+	computational prediction
cro-novel-9	scaffold_2998190	5608	5588	-	computational prediction
cro-novel-90	scaffold_3054271	5850	5827	-	computational prediction
cro-novel-91	scaffold_3016797	6038	6061	+	computational prediction
cro-novel-93	scaffold_3057693	51961	51938	-	computational prediction
cro-novel-94	scaffold_2966372	8634	8657	+	computational prediction
cro-novel-95	scaffold_2972042	16926	16903	-	computational prediction
cro-novel-96	scaffold_3029175	20034	20057	+	computational prediction
cro-novel-97	scaffold_3062939	58386	58409	+	computational prediction
cro-novel-99	scaffold_3022869	10919	10942	+	computational prediction
cro-novel-115	scaffold_2588849				computational prediction
cro-novel-152	scaffold_1229224				computational prediction
cro-novel-4	scaffold_1263261				computational prediction
cro-novel-5	scaffold_1263261				computational prediction