CFinderADM000662's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| protein histidine kinase activity | 0.000105253 | GO:0004673 |
| peptidyl-histidine phosphorylation | 0.000161893 | GO:0018106 |
| peptidyl-tyrosine dephosphorylation | 0.000161893 | GO:0035335 |
| ADP binding | 0.000198561 | GO:0043531 |
| protein tyrosine phosphatase activity | 0.000204273 | GO:0004725 |
| phosphoprotein phosphatase activity | 0.000752109 | GO:0004721 |
| polysaccharide binding | 0.001096545 | GO:0030247 |
| defense response | 0.001650301 | GO:0006952 |
| protein dephosphorylation | 0.001650301 | GO:0006470 |
| anchored component of plasma membrane | 0.002044494 | GO:0046658 |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 0.003195818 | GO:0004553 |
| integral component of membrane | 0.025008592 | GO:0016021 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002650 | AT4G23930 (4.00E-26) | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
| CRO_T013649 | AT3G50950 (0) | ZAR1|HOPZ-ACTIVATED RESISTANCE 1 |
| CRO_T024094 | AT4G13600 (8.00E-19) | Carbohydrate-binding X8 domain superfamily protein |
| CRO_T029498 | AT2G38160 (4.00E-10) | unknown protein |
| CRO_T032330 | AT1G71860 (2.00E-83) | PTP1|protein tyrosine phosphatase 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000829 | Protein_kinases_phosphatases, PPC:1.6.3: Receptor Like Cytoplasmic Kinase V cytosolic proteasome complex nuclear proteasome complex positive regulation of proteasomal protein catabolic process positive regulation of RNA polymerase II transcriptional preinitiation complex assembly proteasome regulatory particle, base subcomplex ER-associated ubiquitin-dependent protein catabolic process activation of MAPKK activity peptidyl-tyrosine dephosphorylation Proteasome TBP-class protein binding proteasome-activating ATPase activity MAP kinase kinase kinase activity protein tyrosine phosphatase activity Transcription_related, Transcription factor: C2C2-GATA ATP binding MAPK cascade Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) formation of glycosidic bonds, GlycosylTransferases: GTnc intracellular part peptidase activity cellular process Golgi apparatus sequence-specific DNA binding adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 intracellular | details |
| CFinderADM001281 | peptidyl-tyrosine dephosphorylation cell periphery homogalacturonan degradation protein tyrosine phosphatase activity pectinesterase inhibitor activity pectinesterase activity Pentose and glucuronate interconversions hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII cell wall organization kinase activity Golgi apparatus | details |
| CFinderADM001328 | fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) unsaturated, even numbered fatty acid β-oxidation peptidyl-tyrosine dephosphorylation protein tyrosine phosphatase activity Transcription_related, Transcription factor: TCP Transcription_related, Transcription factor: C2H2 metabolic process catalytic activity binding | details |
| CFinderADM001401 | γ-glutamyl cycle nuclear proteasome complex cytosolic proteasome complex proteasome regulatory particle, base subcomplex positive regulation of proteasomal protein catabolic process positive regulation of RNA polymerase II transcriptional preinitiation complex assembly peptidyl-tyrosine dephosphorylation ER-associated ubiquitin-dependent protein catabolic process TBP-class protein binding proteasome-activating ATPase activity protein tyrosine phosphatase activity Proteasome peptidase activity | details |
| CFinderADM001457 | methylthioribulose 1-phosphate dehydratase activity 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity acireductone synthase activity cAMP-dependent protein kinase activity L-methionine biosynthetic process from S-adenosylmethionine S-methyl-5-thio-α-D-ribose 1-phosphate degradation Protein_kinases_phosphatases, PPC:1.5.1: Wall Associated Kinase-like Kinase L-methionine biosynthetic process from methylthioadenosine cell surface receptor signaling pathway Cysteine and methionine metabolism dephosphorylation polysaccharide binding magnesium ion binding protein dimerization activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 protein phosphorylation | details |
| CFinderADM001568 | Ubiquitin_Proteasome_system, E3 adaptor: DWD peptidyl-arginine methylation histone-arginine N-methyltransferase activity protein-arginine omega-N asymmetric methyltransferase activity snoRNA binding Protein_kinases_phosphatases, PPC:1.7.2: Domain of Unknown Function 26 (DUF26) Kinase NF-kappa B signaling pathway rRNA processing small-subunit processome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 protein serine/threonine kinase activity protein phosphorylation regulation of transcription, DNA-templated | details |
| CFinderADM001865 | microtubule organizing center spindle pole microtubule nucleation protein histidine kinase activity gamma-tubulin binding peptidyl-tyrosine dephosphorylation peptidyl-histidine phosphorylation protein-cysteine S-palmitoyltransferase activity protein tyrosine phosphatase activity formation of glycosidic bonds, GlycosylTransferases: GTnc polysaccharide binding anchored component of plasma membrane hydrolase activity, hydrolyzing O-glycosyl compounds Golgi apparatus integral component of membrane | details |
| CFinderADM002038 | fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) unsaturated, even numbered fatty acid β-oxidation peptidyl-tyrosine dephosphorylation protein tyrosine phosphatase activity endosome trans-Golgi network catalytic activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 metabolic process integral component of membrane | details |
| CFinderADM002299 | Ubiquitin_Proteasome_system, E3 adaptor: DWD protein phosphorylation cutin biosynthetic process myosin heavy chain kinase activity glycerol-3-phosphate 2-O-acyltransferase activity Protein_kinases_phosphatases, PPC:1.7.2: Domain of Unknown Function 26 (DUF26) Kinase CDP-diacylglycerol biosynthesis I phosphatase activity diacylglycerol and triacylglycerol biosynthesis Fanconi anemia pathway Glycerolipid metabolism NF-kappa B signaling pathway dephosphorylation adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 protein serine/threonine kinase activity plasma membrane | details |
Expression profiles
 Show details about module gene expression profiling |