CFinderADM000790's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| nucleic acid binding | 0.012883755 | GO:0003676 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003181 | - | - |
| CRO_T014904 | AT4G26000 (4.00E-78) | PEP|PEPPER |
| CRO_T019115 | - | - |
| CRO_T030000 | - | - |
| CRO_T031970 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000344 | nucleic acid binding | details |
| CFinderADM000537 | DNA-directed RNA polymerase I complex RNA polymerase I activity Purine metabolism nucleic acid binding | details |
| CFinderADM000557 | Ubiquitin_Proteasome_system, E3 adaptor: Cullin cullin-RING ubiquitin ligase complex ubiquitin protein ligase binding protein ubiquitination involved in ubiquitin-dependent protein catabolic process ubiquitin protein ligase activity Protein processing in endoplasmic reticulum nucleic acid binding hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc xyloglucan metabolic process cell wall biogenesis xyloglucan:xyloglucosyl transferase activity hydrolase activity, hydrolyzing O-glycosyl compounds cell wall organization apoplast Ribosome cell wall | details |
| CFinderADM000597 | Ubiquitin_Proteasome_system, DUB: USP proteolysis chloroplast stroma | details |
| CFinderADM001020 | thiosulfate disproportionation IV (rhodanese) Sulfur metabolism transferase activity nucleic acid binding integral component of membrane | details |
| CFinderADM001297 | Amyotrophic lateral sclerosis (ALS) base-excision repair, AP site formation DNA N-glycosylase activity queuine tRNA-ribosyltransferase activity DNA-(apurinic or apyrimidinic site) lyase activity queuosine biosynthetic process protein import into nucleus, translocation ribosomal protein import into nucleus protein import into nucleus, docking mitochondrial outer membrane translocase complex nuclear membrane nuclear periphery protein import into mitochondrial matrix NLS-bearing protein import into nucleus protein channel activity Base excision repair tRNA modification nuclear localization sequence binding Ran GTPase binding 4 iron, 4 sulfur cluster binding protein transporter activity RNA transport nucleic acid binding DNA binding | details |
| CFinderADM001317 | Transcription_related, Transcription factor: Trihelix transcription, DNA-templated transcription factor activity, sequence-specific DNA binding nucleic acid binding | details |
| CFinderADM002259 | Transcription_related, Transcription regulator: TRAF Golgi organization Ubiquitin_Proteasome_system, E3 adaptor: BTB cytosolic large ribosomal subunit Golgi apparatus Plant hormone signal transduction translation Ribosome nucleic acid binding structural constituent of ribosome | details |
Expression profiles
 Show details about module gene expression profiling |