CFinderADM000926's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| transmembrane transporter activity | 3.08E-13 | GO:0022857 |
| transmembrane transport | 1.39E-07 | GO:0055085 |
| inorganic anion exchanger activity | 3.07E-05 | GO:0005452 |
| nucleoside transmembrane transporter activity | 3.22E-05 | GO:0005337 |
| inorganic anion transport | 7.92E-05 | GO:0015698 |
| nucleoside transmembrane transport | 7.92E-05 | GO:1901642 |
| Transcription_related, Transcription factor: C2C2-Dof | 0.00018738 | TF family |
| regulation of intracellular pH | 0.000256986 | GO:0051453 |
| anion transmembrane transport | 0.000270957 | GO:0098656 |
| integral component of membrane | 0.000378503 | GO:0016021 |
| cell part | 0.001151589 | GO:0044464 |
| plasma membrane | 0.002288902 | GO:0005886 |
| regulation of cellular process | 0.0029151 | GO:0050794 |
| transporter activity | 0.005301922 | GO:0005215 |
| serine-type endopeptidase activity | 0.005301922 | GO:0004252 |
| integral component of plasma membrane | 0.013515088 | GO:0005887 |
| cell wall | 0.014353267 | GO:0005618 |
| transport | 0.016770331 | GO:0006810 |
| proteolysis | 0.027544302 | GO:0006508 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003164 | AT1G07640 (2.00E-22) | URP3|UAS-TAGGED ROOT PATTERNING3 |
| CRO_T008258 | AT1G02630 (4.00E-95) | Nucleoside transporter family protein |
| CRO_T010913 | AT1G15460 (0) | ATBOR4|REQUIRES HIGH BORON 4 |
| CRO_T017686 | AT3G47960 (0) | GTR1|GLUCOSINOLATE TRANSPORTER-1; NPF2.10|NRT1/ PTR family 2.10 |
| CRO_T021354 | AT5G07050 (2.00E-134) | UMAMIT9|Usually multiple acids move in and out Transporters 9 |
| CRO_T023076 | AT1G20160 (0) | ATSBT5.2|Subtilisin-like serine endopeptidase family protein |
| CRO_T023429 | AT5G07050 (8.00E-62) | UMAMIT9|Usually multiple acids move in and out Transporters 9 |
| CRO_T030330 | AT1G75500 (9.00E-135) | UMAMIT5|Usually multiple acids move in and out Transporters 5; WAT1|Walls Are Thin 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000925 | calcium-dependent phospholipid binding transmembrane transporter activity plasma membrane calcium ion binding transmembrane transport cell part integral component of membrane transferase activity, transferring glycosyl groups regulation of cellular process hydrolase activity, hydrolyzing O-glycosyl compounds Plant hormone signal transduction sequence-specific DNA binding endoplasmic reticulum plasmodesma transcription factor activity, sequence-specific DNA binding carbohydrate metabolic process transcription, DNA-templated regulation of transcription, DNA-templated | details |
| CFinderADM000967 | riboflavin synthase complex 6,7-dimethyl-8-ribityllumazine synthase activity response to benzoic acid salicylic acid biosynthetic process regulation of salicylic acid metabolic process systemic acquired resistance Riboflavin metabolism plant-type hypersensitive response response to nitrate riboflavin biosynthetic process flavin biosynthesis I (bacteria and plants) Transcription_related, Transcription factor: C2C2-Dof Transcription_related, Transcription factor: Trihelix benzoate biosynthesis I (CoA-dependent, β-oxidative) defense response to bacterium proteasome-mediated ubiquitin-dependent protein catabolic process ubiquitin protein ligase activity ligase activity protein ubiquitination Ubiquitin_Proteasome_system, E3: RING transferase activity chloroplast stroma | details |
| CFinderADM001554 | basal plasma membrane apical part of cell inorganic anion exchanger activity leaf shaping cotyledon morphogenesis leaf formation inflorescence development transmembrane transport inorganic anion transport gravitropism xylem and phloem pattern formation regulation of intracellular pH anion transmembrane transport flower development auxin polar transport transmembrane transporter activity root development cell part auxin-activated signaling pathway Transcription_related, Transcription factor: bHLH regulation of cellular process plant-type cell wall protein dimerization activity integral component of plasma membrane plasmodesma DNA binding | details |
| CFinderADM001778 | flower development auxin-activated signaling pathway inorganic anion exchanger activity cotyledon morphogenesis apical part of cell basal plasma membrane inflorescence development leaf formation leaf shaping transcription, DNA-templated inorganic anion transport gravitropism response to bacterium xylem and phloem pattern formation Transcription_related, Transcription factor: ARF DNA binding regulation of intracellular pH anion transmembrane transport regulation of transcription, DNA-templated auxin polar transport root development Transcription_related, Transcription factor: MYB nucleus plant-type cell wall integral component of plasma membrane plasmodesma transmembrane transport | details |
Expression profiles
 Show details about module gene expression profiling |