CFinderADM001177's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| micropyle | 1.84E-05 | GO:0070825 |
| coumarin biosynthesis (via 2-coumarate) | 3.14E-05 | plantCyc |
| pyrethrin I biosynthesis | 3.14E-05 | plantCyc |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 5.98E-05 | cazy family |
| Protein_kinases_phosphatases, PPC:1.8.1: Leucine Rich Repeat Kinase I | 5.98E-05 | kinase family |
| Arp2/3 protein complex | 0.000168347 | GO:0005885 |
| Arp2/3 complex-mediated actin nucleation | 0.000523287 | GO:0034314 |
| seed germination | 0.000664167 | GO:0009845 |
| glycosyl compound metabolic process | 0.000664167 | GO:1901657 |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.000700503 | cazy family |
| protein autophosphorylation | 0.002882592 | GO:0046777 |
| beta-glucosidase activity | 0.003212705 | GO:0008422 |
| Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII | 0.005138484 | kinase family |
| hydrolase activity, acting on ester bonds | 0.005707246 | GO:0016788 |
| Endocytosis | 0.007391626 | KEGG pathway |
| Starch and sucrose metabolism | 0.007391626 | KEGG pathway |
| response to oxidative stress | 0.008301809 | GO:0006979 |
| carbohydrate metabolic process | 0.029028737 | GO:0005975 |
| phosphorylation | 0.029028737 | GO:0016310 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000281 | AT1G09970 (0) | RLK7|receptor-like kinase 7 |
| CRO_T001829 | AT1G09320 (2.00E-24) | agenet domain-containing protein |
| CRO_T005453 | AT4G01710 (1.00E-62) | CRK|CROOKED |
| CRO_T006897 | AT1G15760 (3.00E-54) | Sterile alpha motif (SAM) domain-containing protein |
| CRO_T009942 | AT4G21760 (2.00E-134) | BGLU47|beta-glucosidase 47 |
| CRO_T012485 | AT1G58390 (3.00E-34) | Disease resistance protein (CC-NBS-LRR class) family |
| CRO_T018427 | AT1G05700 (0) | Leucine-rich repeat transmembrane protein kinase protein |
| CRO_T019865 | AT1G53920 (5.00E-78) | GLIP5|GDSL-motif lipase 5 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000616 | Arp2/3 protein complex gibberellin 20-oxidase activity N-methyltransferase activity ent-kaurene biosynthesis I 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity gibberellic acid mediated signaling pathway Arp2/3 complex-mediated actin nucleation gibberellin biosynthetic process vitamin E biosynthetic process gibberellin biosynthesis III (early C-13 hydroxylation) flower development response to light stimulus unidimensional cell growth Diterpenoid biosynthesis Ubiquinone and other terpenoid-quinone biosynthesis vindoline and vinblastine biosynthesis Transcription_related, Transcription factor: bHLH Transcription_related, Transcription factor: C2H2 Endocytosis methylation binding iron ion binding | details |
| CFinderADM001644 | Mitophagy - yeast Ubiquitin_Proteasome_system, DUB: USP cellular protein metabolic process coenzyme binding peptidase activity Spliceosome proteolysis catalytic activity RNA binding nucleotide binding | details |
| CFinderADM001767 | pectin biosynthetic process homogalacturonan biosynthesis polygalacturonate 4-alpha-galacturonosyltransferase activity Transcription_related, Transcription factor: HSF formation of glycosidic bonds, GlycosylTransferases: GTnc Amino sugar and nucleotide sugar metabolism cell wall organization Golgi membrane DNA binding | details |
| CFinderADM001855 | Protein_kinases_phosphatases, PPC:1.8.1: Leucine Rich Repeat Kinase I Arp2/3 protein complex Arp2/3 complex-mediated actin nucleation Autophagy - yeast amino acid transmembrane transporter activity amino acid transmembrane transport Endocytosis adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 protein kinase activity phosphorylation | details |
| CFinderADM002178 | coumarin biosynthesis (via 2-coumarate) Protein_kinases_phosphatases, PPC:1.6.1: Leucine Rich Repeat Kinase IX hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc glycosyl compound metabolic process beta-glucosidase activity response to stress MAPK signaling pathway - plant Starch and sucrose metabolism carbohydrate metabolic process protein kinase activity | details |
| CFinderADM002268 | coumarin biosynthesis (via 2-coumarate) Protein_kinases_phosphatases, PPC:1.4.1: Crinkly 4 Like Kinase glycosyl compound metabolic process acetylglucosaminyltransferase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc beta-glucosidase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Starch and sucrose metabolism carbohydrate metabolic process protein serine/threonine kinase activity protein phosphorylation | details |
| CFinderADM002279 | coumarin biosynthesis (via 2-coumarate) carbohydrate metabolic process regulation of meristem growth floral organ development glycosyl compound metabolic process hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 beta-glucosidase activity Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII Starch and sucrose metabolism anchored component of plasma membrane polysaccharide binding hydrolase activity, hydrolyzing O-glycosyl compounds protein kinase activity integral component of membrane oxidoreductase activity protein phosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |