CFinderADM001403's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: C2C2-GATA | 0.000180153 | TF family |
| Transcription_related, Transcription factor: Orphans | 0.000336618 | TF family |
| phosphorelay signal transduction system | 0.000433828 | GO:0000160 |
| Plant hormone signal transduction | 0.003072208 | KEGG pathway |
| regulation of transcription, DNA-templated | 0.02605805 | GO:0006355 |
| intracellular | 0.027864989 | GO:0005622 |
| DNA binding | 0.035078916 | GO:0003677 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003443 | AT1G21140 (8.00E-54) | Vacuolar iron transporter (VIT) family protein |
| CRO_T005708 | AT2G07440 (5.00E-11) | two-component responsive regulator-related / response regulator protein-related |
| CRO_T013147 | AT5G66320 (7.00E-55) | GATA5|GATA transcription factor 5 |
| CRO_T016402 | AT3G19250 (5.00E-21) | Protein of unknown function (DUF677) |
| CRO_T021192 | AT1G36940 (4.00E-09) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000431 | detoxification of copper ion copper ion export Protein_kinases_phosphatases, PPC:1.1.1: Leucine-rich transmembrane protein kinase/Strubbelig Receptor Family 1 copper-exporting ATPase activity Transcription_related, Transcription factor: Orphans phosphorelay signal transduction system protein transport MAPK signaling pathway - plant Plant hormone signal transduction copper ion binding integral component of plasma membrane intracellular membrane-bounded organelle intracellular protein kinase activity protein phosphorylation nucleotide binding | details |
| CFinderADM000601 | proton-transporting two-sector ATPase complex, catalytic domain formation of glycosidic bonds, GlycosylTransferases: GTnc phosphorelay signal transduction system ATP hydrolysis coupled proton transport Transcription_related, Transcription factor: Orphans adenosine ribonucleotides de novo biosynthesis very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II proton-transporting ATPase activity, rotational mechanism Transcription_related, Transcription factor: ERF vacuole | details |
| CFinderADM000930 | seleno-amino acid biosynthesis nuclear euchromatin FACT complex pre-autophagosomal structure membrane ATG1/ULK1 kinase complex Transcription_related, Transcription regulator: HMG cystathionine beta-lyase activity positive regulation of protein phosphorylation 'de novo' L-methionine biosynthetic process autophagosome assembly polar nucleus fusion protein kinase binding Autophagy - yeast vegetative to reproductive phase transition of meristem cellular transition metal ion homeostasis transition metal ion binding metal ion transport DNA replication Biosynthesis of amino acids DNA repair 2-alkenal reductase [NAD(P)] activity pyridoxal phosphate binding plasmodesma chloroplast stroma transcription, DNA-templated regulation of transcription, DNA-templated DNA binding | details |
| CFinderADM001449 | xylan biosynthetic process xylogalacturonan biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc transmembrane transport ATPase activity, coupled to transmembrane movement of substances ATP binding chloroplast envelope transferase activity hydrolase activity integral component of membrane | details |
Expression profiles
 Show details about module gene expression profiling |