CFinderADM001798's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| entrainment of circadian clock | 4.05E-05 | GO:0009649 |
| photoperiodism, flowering | 4.05E-05 | GO:0048573 |
| positive regulation of circadian rhythm | 4.05E-05 | GO:0042753 |
| red or far-red light signaling pathway | 4.05E-05 | GO:0010017 |
| response to red light | 4.05E-05 | GO:0010114 |
| regulation of flower development | 0.000183766 | GO:0009909 |
| protein homodimerization activity | 0.006864185 | GO:0042803 |
| metabolic process | 0.022076257 | GO:0008152 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004552 | AT3G14470 (5.00E-109) | NB-ARC domain-containing disease resistance protein |
| CRO_T006475 | AT2G06255 (1.00E-17) | ELF4-L3|ELF4-like 3 |
| CRO_T007684 | AT5G32450 (2.00E-103) | RNA binding (RRM/RBD/RNP motifs) family protein |
| CRO_T008230 | AT5G23230 (5.00E-48) | NIC2|nicotinamidase 2 |
| CRO_T011031 | AT5G20480 (1.00E-49) | EFR|EF-TU receptor |
| CRO_T011314 | - | - |
| CRO_T023124 | AT1G48090 (2.00E-180) | calcium-dependent lipid-binding family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001036 | Z-farnesyl diphosphate synthase activity farnesyl diphosphate biosynthetic process geranyltranstransferase activity dimethylallyltranstransferase activity trans, trans-farnesyl diphosphate biosynthesis geranylgeranyl diphosphate biosynthesis polyisoprenoid biosynthesis superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) Terpenoid backbone biosynthesis membrane part cellular process metabolic process nucleic acid binding hydrolase activity cytoplasm | details |
| CFinderADM001589 | metabolic process nucleic acid binding hydrolase activity | details |
Expression profiles
 Show details about module gene expression profiling |