CFinderADM001973's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Pyruvate metabolism | 4.02E-05 | KEGG pathway |
| response to stress | 0.001073193 | GO:0006950 |
| Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII | 0.004000387 | kinase family |
| Transcription_related, Transcription factor: ERF | 0.004000387 | TF family |
| Ubiquitin_Proteasome_system, E3 adaptor: F-box | 0.012326059 | ubs family |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.01329523 | cazy family |
| protein kinase activity | 0.01809342 | GO:0004672 |
| protein phosphorylation | 0.025665897 | GO:0006468 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T012937 | AT1G17230 (0) | Leucine-rich receptor-like protein kinase family protein |
| CRO_T015661 | AT3G03270 (0.000000009) | Adenine nucleotide alpha hydrolases-like superfamily protein |
| CRO_T020242 | AT3G16770 (9.00E-15) | ATEBP|ethylene-responsive element binding protein; ERF72|ETHYLENE RESPONSE FACTOR 72; RAP2.3|RELATED TO AP2 3 |
| CRO_T026304 | AT4G14096 (6.00E-20) | F-box/RNI-like superfamily protein |
| CRO_T030217 | AT1G11840 (5.00E-12) | ATGLX1|glyoxalase I homolog |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000261 | Protein export Ubiquitin mediated proteolysis formation of glycosidic bonds, GlycosylTransferases: GTnc Ubiquitin_Proteasome_system, E3 adaptor: F-box nucleotide binding | details |
| CFinderADM000548 | Pyruvate metabolism Protein export proteolysis involved in cellular protein catabolic process serine-type carboxypeptidase activity helicase activity microtubule vacuole formation of glycosidic bonds, GlycosylTransferases: GTnc sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding | details |
| CFinderADM001079 | benzoyl-β-D-glucopyranose biosynthesis salicylate glucosides biosynthesis IV mature ribosome assembly ribosomal large subunit binding ribosomal large subunit biogenesis ribosome binding response to stress translational initiation flavonoid glucuronidation translation initiation factor activity quercetin 7-O-glucosyltransferase activity quercetin 3-O-glucosyltransferase activity flavonoid biosynthetic process nucleolus formation of glycosidic bonds, GlycosylTransferases: GTnc hydrolase activity oxidoreductase activity | details |
| CFinderADM001080 | Cytochrome_P450, Cytochrome P450: CYP75B pantothenate kinase activity coenzyme A biosynthetic process phosphopantothenate biosynthesis I Pantothenate and CoA biosynthesis costunolide biosynthesis gossypetin metabolism luteolin biosynthesis Autophagy - animal Cytochrome_P450, Cytochrome P450: CYP71B flavonol biosynthesis secondary metabolite biosynthetic process oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen Ubiquitin_Proteasome_system, E3 adaptor: DWD Ubiquitin_Proteasome_system, E3 adaptor: F-box phosphorylation heme binding iron ion binding hydrolase activity | details |
| CFinderADM001461 | Fluorobenzoate degradation trehalose-phosphatase activity pentose phosphate pathway (non-oxidative branch) trehalose biosynthetic process ethylene biosynthesis I (plants) flavonoid biosynthesis (in equisetum) flavonol biosynthesis Rubisco shunt syringetin biosynthesis protein processing metalloendopeptidase activity response to stress dephosphorylation embryo development ending in seed dormancy dioxygenase activity Carbon metabolism hydrolase activity | details |
| CFinderADM001654 | Protein_kinases_phosphatases, PPC:1.8.1: Leucine Rich Repeat Kinase I Transcription_related, Transcription regulator: PHD response to stress adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 oxidoreductase activity Ubiquitin_Proteasome_system, E3: RING | details |
| CFinderADM001700 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Transcription_related, Transcription factor: NF-X1 positive regulation of long-day photoperiodism, flowering negative regulation of transcription from RNA polymerase II promoter temperature compensation of the circadian clock response to far red light response to blue light Circadian rhythm response to hydrogen peroxide Autophagy - animal Circadian rhythm - plant NOD-like receptor signaling pathway response to cold RNA polymerase II regulatory region sequence-specific DNA binding transcription from RNA polymerase II promoter nucleoplasm Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK) nucleus MAPK signaling pathway - plant defense response intracellular signal transduction Ubiquitin_Proteasome_system, E3 adaptor: DWD Ubiquitin_Proteasome_system, E3 adaptor: F-box formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001765 | hydroxyjasmonate sulfate biosynthesis indole-3-acetate activation I wogonin metabolism hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Glycosaminoglycan degradation baicalein degradation (hydrogen peroxide detoxification) SCF ubiquitin ligase complex SCF-dependent proteasomal ubiquitin-dependent protein catabolic process hydrolase activity, acting on glycosyl bonds response to stress formation of glycosidic bonds, GlycosylTransferases: GTnc ubiquitin-protein transferase activity Ubiquitin_Proteasome_system, E3 adaptor: F-box carbohydrate metabolic process metabolic process hydrolase activity | details |
| CFinderADM001892 | anion transport small ribosomal subunit transmembrane transporter activity Transcription_related, Transcription factor: C2H2 Transcription_related, Transcription factor: ERF vacuolar membrane Ribosome transmembrane transport translation structural constituent of ribosome nucleic acid binding RNA binding | details |
| CFinderADM002065 | protein targeting to membrane plasmodesma regulation of shoot system development vesicle docking cell differentiation SNARE interactions in vesicular transport Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase vesicle fusion calcium-dependent protein serine/threonine kinase activity signal transducer activity calmodulin-dependent protein kinase activity SNARE binding SNAP receptor activity peptidyl-serine phosphorylation protein autophosphorylation abscisic acid-activated signaling pathway SNARE complex plasma membrane Transcription_related, Transcription factor: ERF Transcription_related, Transcription factor: GRAS calmodulin binding defense response signal transduction intracellular signal transduction anchored component of plasma membrane integral component of membrane nucleus Plant hormone signal transduction endoplasmic reticulum calcium ion binding sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding | details |
| CFinderADM002218 | NuA4 histone acetyltransferase complex regulation of timing of transition from vegetative to reproductive phase histone H4-K5 acetylation regulation of flower development ethylene biosynthesis I (plants) leucodelphinidin biosynthesis pinobanksin biosynthesis Transcription_related, Transcription regulator: PHD Flavonoid biosynthesis flavonoid biosynthesis (in equisetum) response to stress Ubiquitin_Proteasome_system, E3: RING oxidoreductase activity regulation of transcription, DNA-templated | details |
Expression profiles
 Show details about module gene expression profiling |