TissueCFM000526's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| guanosine nucleotides degradation I | 0.015721607 | plantCyc |
| guanosine nucleotides degradation II | 0.015721607 | plantCyc |
| pyrimidine salvage pathway | 0.015721607 | plantCyc |
| 5'-nucleotidase activity | 0.020228563 | GO:0008253 |
| adenosine nucleotides degradation I | 0.020594428 | plantCyc |
| Protein export | 0.025337012 | KEGG pathway |
| Pyrimidine metabolism | 0.025337012 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001051 | AT4G22930 (2.00E-05) | DHOASE|DIHYDROOROTASE; PYR4|pyrimidin 4 |
| CRO_T002232 | AT1G23170 (3.00E-23) | Protein of unknown function DUF2359, transmembrane |
| CRO_T002507 | AT1G24160 (4.00E-17) | unknown protein |
| CRO_T004273 | - | - |
| CRO_T010928 | AT1G04560 (8.00E-40) | AWPM-19-like family protein |
| CRO_T013950 | AT1G75210 (0) | HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase |
| CRO_T013996 | AT1G68825 (1.00E-05) | DVL5|DEVIL 5; RTFL15|ROTUNDIFOLIA like 15 |
| CRO_T014110 | AT1G78720 (2.00E-34) | SecY protein transport family protein |
| CRO_T015816 | AT5G19700 (5.00E-124) | MATE efflux family protein |
| CRO_T016490 | AT2G40610 (4.00E-104) | ATEXPA8|expansin A8 |
| CRO_T019881 | - | - |
| CRO_T032957 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000103 | details | |
| TissueCFM000137 | aldehyde oxidase activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 carpel development regulation of meristem structural organization glycopeptide alpha-N-acetylgalactosaminidase activity sucrose alpha-glucosidase activity enzyme inhibitor activity glucan endo-1,3-beta-D-glucosidase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Transcription_related, Transcription factor: HB polysaccharide binding | details |
| TissueCFM000143 | adenine and adenosine salvage II | details |
| TissueCFM000167 | details | |
| TissueCFM000191 | DNA binding transcription factor activity, sequence-specific DNA binding hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: ARR-B Transcription_related, Transcription factor: ERF Transcription_related, Transcription factor: MYB Transcription_related, Transcription factor: Tify | details |
| TissueCFM000204 | Amino sugar and nucleotide sugar metabolism glucose import glucose transmembrane transport proton transport glucose transmembrane transporter activity sugar:proton symporter activity | details |
| TissueCFM000527 | Diterpenoid biosynthesis gibberellin 3-beta-dioxygenase activity gibberellin 20-oxidase activity ent-kaurene biosynthesis I gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) gibberellin biosynthesis III (early C-13 hydroxylation) regulation of meristem structural organization carpel development gibberellin biosynthetic process gibberellic acid mediated signaling pathway glucan endo-1,3-beta-D-glucosidase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: HB cellular transition metal ion homeostasis response to light stimulus flower development unidimensional cell growth metal ion transport transition metal ion binding helicase activity polysaccharide binding | details |
| TissueCFM000560 | exosome (RNase complex) snRNA 3'-end processing rRNA metabolic process nuclear polyadenylation-dependent ncRNA catabolic process nuclear-transcribed mRNA catabolic process, exonucleolytic regulation of meristem structural organization carpel development RNA degradation Transcription_related, Transcription factor: HB sequence-specific DNA binding nucleic acid phosphodiester bond hydrolysis | details |
| TissueCFM001097 | Nicotinate and nicotinamide metabolism drug transmembrane transport antiporter activity drug transmembrane transporter activity | details |
| TissueCFM001263 | 5-deoxystrigol biosynthesis sulfur compound metabolic process purine ribonucleotide metabolic process adenylylsulfatase activity drug transmembrane transport | details |
Expression profiles
 Show details about module gene expression profiling |