TissueCFM000825's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Spliceosome | 0.029426413 | KEGG pathway |
| transmembrane transport | 0.048810377 | GO:0055085 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005092 | AT3G11230 (2.00E-32) | Yippee family putative zinc-binding protein |
| CRO_T012096 | AT1G60030 (2.00E-87) | ATNAT7|ARABIDOPSIS NUCLEOBASE-ASCORBATE TRANSPORTER 7; NAT7|nucleobase-ascorbate transporter 7 |
| CRO_T016526 | - | - |
| CRO_T023944 | AT5G06390 (2.00E-155) | FLA17|FASCICLIN-like arabinogalactan protein 17 precursor |
| CRO_T028054 | - | - |
| CRO_T030459 | AT1G16030 (0) | Hsp70b|heat shock protein 70B |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000482 | Meiosis - yeast positive regulation of autophagy DNA catabolic process, endonucleolytic RNA biosynthetic process hexose transmembrane transport DNA topological change glucose import DNA topoisomerase complex (ATP-hydrolyzing) chloroplast inner membrane chromosome DNA topoisomerase type II (ATP-hydrolyzing) activity DNA-directed RNA polymerase activity identical protein binding sugar:proton symporter activity glucose transmembrane transporter activity | details |
| TissueCFM000525 | enoyl-CoA hydratase activity 3-hydroxyacyl-CoA dehydrogenase activity transferase activity, transferring phosphorus-containing groups 3-hydroxyacyl-CoA dehydratase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc fatty acid beta-oxidation jasmonic acid biosynthetic process ascorbate glutathione cycle unsaturated, even numbered fatty acid β-oxidation flower development cellulose catabolic process cellulase activity fatty acid β-oxidation II (peroxisome) jasmonic acid biosynthesis mRNA binding very long chain fatty acid biosynthesis II protein disulfide oxidoreductase activity Fatty acid metabolism microtubule binding cell redox homeostasis | details |
| TissueCFM001599 | Terpenoid backbone biosynthesis mevalonate pathway I calcium:proton antiporter activity farnesol dehydrogenase activity hydroxymethylglutaryl-CoA reductase (NADPH) activity coenzyme A metabolic process transmembrane transport farnesol metabolic process integral component of membrane Transcription_related, Transcription factor: MYB-related ABC transporters negative regulation of abscisic acid-activated signaling pathway isoprenoid biosynthetic process calcium ion transmembrane transport plasma membrane NADP binding coenzyme binding oxidation-reduction process | details |
| TissueCFM001717 | farnesol dehydrogenase activity farnesol metabolic process transmembrane transport ABC transporters Terpenoid backbone biosynthesis negative regulation of abscisic acid-activated signaling pathway Transcription_related, Transcription factor: MYB-related Ubiquitin_Proteasome_system, DUB: USP cellular protein metabolic process cysteine-type peptidase activity coenzyme binding | details |
| TissueCFM001805 | transmembrane transport ABC transporters cellular protein metabolic process Transcription_related, Transcription factor: MYB-related Ubiquitin_Proteasome_system, DUB: USP cysteine-type peptidase activity | details |
Expression profiles
 Show details about module gene expression profiling |