TissueCFM001252's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
Function Annotation | FDR | Gene Ontolog |
---|---|---|
kinase activity | 0.004858391 | GO:0016301 |
Protein_kinases_phosphatases, PPC:4.3.2: Unknown Function Kinase | 0.006072695 | kinase family |
response to organic substance | 0.007358482 | GO:0010033 |
phosphorylation | 0.007358482 | GO:0016310 |
response to oxygen-containing compound | 0.007358482 | GO:1901700 |
regulation of apoptotic process | 0.007358482 | GO:0042981 |
regulation of seed germination | 0.007358482 | GO:0010029 |
response to abiotic stimulus | 0.007358482 | GO:0009628 |
triglyceride biosynthetic process | 0.007358482 | GO:0019432 |
negative regulation of mRNA splicing, via spliceosome | 0.007358482 | GO:0048025 |
microtubule cytoskeleton organization | 0.008239065 | GO:0000226 |
RNA metabolic process | 0.008239065 | GO:0016070 |
diacylglycerol and triacylglycerol biosynthesis | 0.008482389 | plantCyc |
diacylglycerol O-acyltransferase activity | 0.010115924 | GO:0004144 |
Protein_kinases_phosphatases, PPC:4.1.1: MAP3K | 0.013147787 | kinase family |
microtubule cytoskeleton | 0.017689008 | GO:0015630 |
cytoskeletal part | 0.017689008 | GO:0044430 |
MAPK signaling pathway | 0.019479062 | KEGG pathway |
Glycerolipid metabolism | 0.025746909 | KEGG pathway |
lipid binding | 0.028928365 | GO:0008289 |
response to stress | 0.030398515 | GO:0006950 |
Transcription_related, Transcription regulator: SNF2 | 0.030939765 | TF family |
Module member annotation
Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
---|---|---|
CRO_T014563 | AT5G24360 (8.00E-171) | ATIRE1-1|INOSITOL REQUIRING 1-1 |
CRO_T015017 | AT1G11100 (0) | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related |
CRO_T019753 | AT5G11850 (4.00E-120) | Protein kinase superfamily protein |
CRO_T025007 | AT2G19450 (4.00E-166) | ATDGAT|acyl-CoA:diacylglycerol acyltransferase; DGAT1|acyl-CoA:diacylglycerol acyltransferase 1; TAG1|TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1 |
CRO_T028548 | AT5G35180 (4.00E-60) | Protein of unknown function (DUF1336) |
CRO_T029124 | AT1G63700 (8.00E-92) | EMB71|EMBRYO DEFECTIVE 71; MAPKKK4|MAP KINASE KINASE KINASE 4; YDA|YODA |
Direct connection functional modules
Module ID | Function Annotation | Overlap condition |
---|---|---|
TissueCFM000255 | NAD metabolic process NADP biosynthetic process phosphorylation Protein_kinases_phosphatases, PPC:4.3.2: Unknown Function Kinase NAD+ kinase activity NAD/NADH phosphorylation and dephosphorylation RNA metabolic process Nicotinate and nicotinamide metabolism Protein_kinases_phosphatases, PPC:1.3.1: Receptor-like protein kinase formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
TissueCFM001251 | Lysosome high-affinity potassium ion import Transcription_related, Transcription factor: CAMTA sodium ion transmembrane transporter activity lipid transporter activity lipid transport microtubule cytoskeleton organization sodium ion transmembrane transport cytoskeletal part nuclear periphery microtubule cytoskeleton Protein_kinases_phosphatases, PPC:4.1.1: MAP3K potassium ion transmembrane transporter activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII plasma membrane protein dephosphorylation protein serine/threonine phosphatase activity | details |
Expression profiles
![]() Show details about module gene expression profiling |