TreatCFM001745's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| COPII vesicle coat | 0.006378735 | GO:0030127 |
| protein homooligomerization | 0.010421681 | GO:0051260 |
| sterol biosynthetic process | 0.010421681 | GO:0016126 |
| endoplasmic reticulum membrane | 0.031117503 | GO:0005789 |
| ER to Golgi vesicle-mediated transport | 0.033792973 | GO:0006888 |
| Steroid biosynthesis | 0.035020888 | KEGG pathway |
| fatty acid biosynthetic process | 0.043450976 | GO:0006633 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002511 | AT1G24460 (1.00E-39) | TNO1|TGN-localized SYP41 interacting protein |
| CRO_T006748 | AT2G25730 (9.00E-91) | unknown protein |
| CRO_T015100 | AT4G32640 (6.00E-87) | Sec23/Sec24 protein transport family protein |
| CRO_T028051 | AT2G44920 (8.00E-04) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T032034 | - | - |
| CRO_T032573 | AT3G44600 (1.00E-38) | CYP71|cyclophilin 71 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001153 | 3-hydroxyacyl-CoA dehydrogenase activity unsaturated, even numbered fatty acid β-oxidation fatty acid β-oxidation II (peroxisome) fatty acid metabolic process Fatty acid metabolism very long chain fatty acid biosynthesis II Valine, leucine and isoleucine degradation innate immune response protein monoubiquitination histone ubiquitination cytidine to uridine editing leucine catabolic process L-leucine degradation I reproductive structure development SCF-dependent proteasomal ubiquitin-dependent protein catabolic process post-embryonic development jasmonic acid biosynthesis cobalt ion binding SCF ubiquitin ligase complex | details |
| TreatCFM001285 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process SCF ubiquitin ligase complex ubiquitin-protein transferase activity Ubiquitin_Proteasome_system, E3 adaptor: F-box Endocytosis Spliceosome | details |
| TreatCFM001474 | COPII vesicle coat sterol biosynthetic process ER to Golgi vesicle-mediated transport fatty acid biosynthetic process | details |
| TreatCFM002012 | redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 phosphatidate phosphatase activity oxidoreductase activity phospholipid dephosphorylation phospholipid metabolic process sterol biosynthetic process COPII vesicle coat diacylglycerol and triacylglycerol biosynthesis phosphatidate metabolism, as a signaling molecule Glycerolipid metabolism Steroid biosynthesis ER to Golgi vesicle-mediated transport integral component of plasma membrane endoplasmic reticulum membrane | details |
| TreatCFM002176 | intracellular protein transport SNARE complex disassembly membrane fusion soluble NSF attachment protein activity syntaxin binding SCF-dependent proteasomal ubiquitin-dependent protein catabolic process Autophagy - yeast Lysosome NF-kappa B signaling pathway SCF ubiquitin ligase complex membrane coat vesicle-mediated transport Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII SNARE complex protein transporter activity | details |
Expression profiles
 Show details about module gene expression profiling |