TreatCFM001990's detailed annotation
Protein:
Yellow color--query protein
Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein
Blue--proteins own interaction and negative co-expression relationship with target protein
Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
simple leaf morphogenesis0.01038718GO:0060776
CDP-diacylglycerol biosynthesis I0.012723584plantCyc
diacylglycerol and triacylglycerol biosynthesis0.012723584plantCyc
regulation of auxin mediated signaling pathway0.012981097GO:0010928
leaf vascular tissue pattern formation0.013492362GO:0010305
cutin biosynthetic process0.013492362GO:0010143
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process0.013492362GO:0031146
peptidyl-histidine phosphorylation0.01469887GO:0018106
protein histidine kinase activity0.020902102GO:0004673
glycerol-3-phosphate 2-O-acyltransferase activity0.020902102GO:0090447
phosphatase activity0.024635553GO:0016791
Glycerolipid metabolism 0.028087537KEGG pathway
SCF ubiquitin ligase complex0.030336564GO:0019005
Transcription_related, Transcription factor: C2H20.041260108TF family
polysaccharide binding0.04886595GO:0030247

Module member annotation

Gene IDOrtholog in Arabidopsis (Blast E-value)Annotation in Arabidopsis
CRO_T010660AT1G25250 (9.00E-84)AtIDD16|indeterminate(ID)-domain 16
CRO_T010920AT4G33160 (2.00E-22)F-box family protein
CRO_T014804AT1G26910 (3.00E-114)RPL10B|ribosomal protein L10 B
CRO_T024094AT4G13600 (8.00E-19)Carbohydrate-binding X8 domain superfamily protein
CRO_T026861AT1G01610 (0)ATGPAT4|GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 4
CRO_T031713--

Direct connection functional modules

Module IDFunction AnnotationOverlap condition
TreatCFM001824formation of glycosidic bonds, GlycosylTransferases: GTnc
oligosaccharide metabolic process
sialylation
protein N-linked glycosylation via asparagine
sialyltransferase activity
galactosyltransferase activity
microtubule-based movement
details
TreatCFM002007Transcription_related, Transcription factor: Alfin-like
Transcription_related, Transcription factor: zf-HD
Transcription_related, Transcription factor: TCP
deoxyribonucleoside diphosphate metabolic process
deoxyribonucleotide biosynthetic process
regulation of cell cycle
peptidyl-histidine phosphorylation
protein histidine kinase activity
ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
ribonucleoside-diphosphate reductase complex
Purine metabolism
multicellular organism development
details
TreatCFM002076eukaryotic translation initiation factor 2B complex
SCF ubiquitin ligase complex
proteasome complex
S-methyl-5-thioribose-1-phosphate isomerase activity
myosin heavy chain kinase activity
guanyl-nucleotide exchange factor activity
simple leaf morphogenesis
regulation of auxin mediated signaling pathway
L-methionine biosynthetic process from methylthioadenosine
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
leaf vascular tissue pattern formation
Fanconi anemia pathway
Proteasome
regulation of translational initiation
positive regulation of GTPase activity
translational initiation
RNA transport
translation initiation factor activity
2-alkenal reductase [NAD(P)] activity
details

Expression profiles


Show details about module gene expression profiling
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