Solyc01g102790.2's detail annotation
Phytozome annotation
| Pentatricopeptide repeat (PPR) superfamily protein |
Network
Functional module
Location information
| Gene | Assembly | Sources | Chr | Start | End | Strand |
|---|
| Solyc01g102790.2 | SL2.40 | phytozomev10 | SL2.40ch01 | 83258225 | 83260605 | - |
Gene structure and chromatin state
Sequences
Top hits annotation
| Species | Top Hits | E-value | Annotation |
|---|
| Nicotiana benthamiana(v0.44) | NbS00024255g0005.1 | 2.00E-56 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KHY5_ARALY) |
| Nicotiana benthamiana(v0.44) | NbS00037575g0002.1 | 0 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KHY5_ARALY) |
| Nicotiana benthamiana(v0.44) | NbS00008861g0001.1 | 2.00E-52 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KHY5_ARALY) |
| Nicotiana benthamiana(v0.44) | NbS00028068g0003.1 | 8.00E-170 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KHY5_ARALY) |
| Capsicum annuum | Capang01g004304 | 0 | |
| Capsicum annuum | Capana08g001655 | 3.00E-146 | |
| Capsicum annuum | CA08g13680 | 0 | Pentatricopeptide repeat-containing protein |
| Capsicum annuum | CA08g13220 | 1.00E-155 | Detected protein of unknown function |
| Nicotiana benthamiana(v1.01) | Niben101Scf00825g02004.1 | 4.00E-114 | Pentatricopeptide repeat-containing protein |
| Solanum pennellii | Sopen01g045190.1 | 0 | PPR repeat |
| Petunia axillaris | Peaxi162Scf00194g00103.1 | 0 | Pentatricopeptide repeat-containing protein |
| Petunia inflata | Peinf101Scf01484g00002.1 | 2.00E-96 | Pentatricopeptide repeat-containing protein |
| Petunia inflata | Peinf101Scf01943g00002.1 | 3.00E-95 | Pentatricopeptide repeat-containing protein |
Gene family
KEGG pathway
| KO |
Enzyme |
Enzyme ID |
pathway |
mapID |
| - | - | - | - | - |
PlantCyC
| Enzyme ID |
Description |
Pathway |
Pathway id |
| - | - | - | - |
Gene Ontology
| GO term | Description | Category |
|---|
| - | - | - |
Pfam Domain
Expression pattern