Gene set enrichment analysis (PlantGSEA)

The GO terms, gene families, pathway information from our functional annotations were used as background gene sets. Users could submit gene list to obtain significantly gene sets.


Choose Gene Sets
G1: Gene ontology gene sets
BP: GO biological process  CC: GO cellular component  MF: GO molecular function
G2: Gene Family Based gene sets
G3: Curated gene sets
PlantCyc: PlantCyc gene sets  KEGG: KEGG gene sets  LIT: References colleted gene sets
G4: MicroRNA Targets
G5: CFinder predicted modules based on co-expression network
Global network module
Tissue preferential network module
Stress differential network module
Choose Background
Suggested background (Whole genome level)
Customized background
Submit Your Query
Example
Or you can upload file (size <= 5MB)
Parameter Select(optional)
   
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