Solyc01g106610.2's detail annotation

Phytozome annotation

CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein

Network

Network CategoryGlobal NetworkTissue Preferential NetworkStress differential network
Coexpression PositiveTop300 PCC genelistTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelistTop300 PCC genelist
PPI relationshipnull
miRNA-target relationshipnull

Functional module

Module IDFunction AnnotationCategory
CFinderADM000024peroxidase activity
response to oxidative stress
heme binding
ADP_binding
Asthma
EGFR_tyrosine_kinase_inhibitor_resistance
global network

Location information

GeneAssemblySourcesChrStartEndStrand
Solyc01g106610.2SL2.40phytozomev10SL2.40ch018618356586184540+

Gene structure and chromatin state

more details in UCSCdetails of chromatin state

Sequences

Gene:
Transcript:
CDS:
Protein:

Top hits annotation

SpeciesTop HitsE-valueAnnotation
Arabidopsis thalianaAT2G145801.00E-42basic pathogenesis-related protein 1
Solanum tuberosumPGSC0003DMP4000090801.00E-87Triacylglycerol lipase
Solanum tuberosumPGSC0003DMP4000090821.00E-72WREBP-2 protein
Solanum tuberosumPGSC0003DMP4000090835.00E-71Surfeit locus protein 5 family protein
Capsicum annuumCapang01g0047383E-74
Capsicum annuumCapang01g0047375E-63
Capsicum annuumCapang01g0047391E-42
Capsicum annuumCapana08g0021923.00E-74
Capsicum annuumCA01g311103.00E-81PREDICTED: basic form of pathogenesis-related protein 1-like [Solanum tuberosum]
Capsicum annuumCA01g310603.00E-74PREDICTED: basic form of pathogenesis-related protein 1-like [Solanum tuberosum]
Capsicum annuumCA01g310803.00E-67PREDICTED: basic form of pathogenesis-related protein 1-like [Solanum tuberosum]
Nicotiana benthamiana(v1.01)Niben101Scf04053g02006.13.00E-72Cysteine-rich venom protein
Nicotiana benthamiana(v1.01)Niben101Scf04053g02007.16.00E-68Cysteine-rich venom protein
Nicotiana benthamiana(v1.01)Niben101Scf00953g03009.12.00E-53Cysteine-rich venom protein
Solanum pennelliiSopen01g048960.14.00E-90Cysteine-rich secretory protein family
Solanum pennelliiSopen01g048970.13.00E-72Cysteine-rich secretory protein family
Petunia axillarisPeaxi162Scf00016g00332.16.00E-73CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Petunia axillarisPeaxi162Scf00016g03348.11.00E-60CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Petunia inflataPeinf101Scf00395g05049.11.00E-58CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Petunia inflataPeinf101Scf00049g15006.14.00E-42CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Solanum melongenaSme2.5_00057.1_g00029.14.00E-91
Solanum melongenaSme2.5_00057.1_g00030.15.00E-58

Gene family

Gene familySubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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PlantCyC

Enzyme ID Description Pathway Pathway id
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Gene Ontology

GO termDescriptionCategory
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Pfam Domain

Pfam accessionPfam nameAlignment startAlignment end
PF00188.22CAP29146

Expression pattern

 1. Expression trend for Solyc01g106610.2 global RNA-seq network
 2. Expression trend for Solyc01g106610.2 tissue preferential conditional network
 3. Expression trend for Solyc01g106610.2 stress differential conditional network
 4. Expression trend for Solyc01g106610.2 in different samples during fruit ripening
TOP