Solyc02g030290.1's detail annotation
Phytozome annotation
| NB-ARC domain-containing disease resistance protein |
Network
Functional module
| Module ID | Function Annotation | Category |
|---|
| TissueCFM000190 | telomere maintenance
DNA repair
DNA helicase activity
hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89
| Tissue preferential network |
Location information
| Gene | Assembly | Sources | Chr | Start | End | Strand |
|---|
| Solyc02g030290.1 | SL2.40 | phytozomev10 | SL2.40ch02 | 16182278 | 16183491 | - |
Gene structure and chromatin state
Sequences
Top hits annotation
| Species | Top Hits | E-value | Annotation |
|---|
| Capsicum annuum | Capang01g000780 | 9.00E-48 | |
| Capsicum annuum | Capang01g000839 | 4.00E-46 | |
| Capsicum annuum | Capana01g000864 | 1.00E-47 | |
| Capsicum annuum | Capana04g002555 | 5.00E-47 | |
| Capsicum annuum | Capana01g004043 | 3.00E-46 | |
| Capsicum annuum | CA01g08280 | 1.00E-47 | Late blight resistance protein Rpi-sto1 |
| Capsicum annuum | CA04g03450 | 5.00E-47 | RB (Fragment) |
| Capsicum annuum | CA00g82230 | 3.00E-46 | Cc-nbs-lrr resistance protein |
| Nicotiana benthamiana(v1.01) | Niben101Scf05011g01007.1 | 2.00E-50 | Disease resistance protein |
| Solanum pennellii | Sopen10g034900.1 | 9.00E-52 | NB-ARC domain |
| Petunia axillaris | Peaxi162Scf00384g01223.1 | 3.00E-50 | HOPZ-ACTIVATED RESISTANCE 1 |
| Petunia inflata | Peinf101Scf00116g06022.1 | 2.00E-48 | Unknown protein |
| Petunia inflata | Peinf101Scf00756g04010.1 | 3.00E-47 | Disease resistance protein (CC-NBS-LRR class) family |
Gene family
KEGG pathway
| KO |
Enzyme |
Enzyme ID |
pathway |
mapID |
| - | - | - | - | - |
PlantCyC
| Enzyme ID |
Description |
Pathway |
Pathway id |
| - | - | - | - |
Gene Ontology
Pfam Domain
| Pfam accession | Pfam name | Alignment start | Alignment end |
|---|
| PF00931.18 | NB-ARC | 93 | 313 |
Expression pattern