Solyc02g030520.1's detail annotation
Phytozome annotation
Network
| Network Category | Global Network | Tissue Preferential Network | Stress differential network |
|---|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist | Top300 PCC genelist |
| PPI relationship | null | ||
| miRNA-target relationship | null | ||
Functional module
| Module ID | Function Annotation | Category |
|---|---|---|
| CFinderADM000255 | dimethylallyltranstransferase activity tRNA processing proton-transporting ATP synthase complex, catalytic core F(1) biosynthetic process tRNA (guanine-N2-)-methyltransferase activity ATP metabolic process proton transport ATP synthesis coupled proton transport trans-zeatin biosynthesis Epstein-Barr_virus_infection adenosine ribonucleotides de novo biosynthesis | global network |
Location information
| Gene | Assembly | Sources | Chr | Start | End | Strand |
|---|---|---|---|---|---|---|
| Solyc02g030520.1 | SL2.40 | phytozomev10 | SL2.40ch02 | 16986814 | 16987127 | - |
Gene structure and chromatin state
| more details in UCSC | details of chromatin state |
Sequences
| Gene: |
| >Solyc02g030520.1 |
| Transcript: |
| Solyc02g030520.1.1 |
| CDS: |
| Solyc02g030520.1.1 |
| Protein: |
| Solyc02g030520.1.1 |
Top hits annotation
| Species | Top Hits | E-value | Annotation |
|---|
Gene family
| Gene family | Subfamily |
|---|---|
| - | - |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| - | - | - | - | - |
PlantCyC
| Enzyme ID | Description | Pathway | Pathway id |
|---|---|---|---|
| - | - | - | - |
Gene Ontology
| GO term | Description | Category |
|---|---|---|
| - | - | - |
Pfam Domain
| Pfam accession | Pfam name | Alignment start | Alignment end |
|---|---|---|---|
| - | - | - | - |