Solyc03g095330.2's detail annotation

Phytozome annotation

Network

Network CategoryGlobal NetworkTissue Preferential NetworkStress differential network
Coexpression PositiveTop300 PCC genelistTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelistTop300 PCC genelist
PPI relationshipnull
miRNA-target relationshipnull

Functional module

Module IDFunction AnnotationCategory
CFinderADM000174galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
E3 adaptor: Cullin
nucleoside metabolic process
membrane
ubiquitin protein ligase binding
ubiquitin-dependent protein catabolic process
xylan biosynthesis
S-methyl-5'-thioadenosine degradation I
Amino_sugar_and_nucleotide_sugar_metabolism
Cysteine_and_methionine_metabolism
global network

Location information

GeneAssemblySourcesChrStartEndStrand
Solyc03g095330.2SL2.40phytozomev10SL2.40ch034982490249825413+

Gene structure and chromatin state

more details in UCSCdetails of chromatin state

Sequences

Gene:
Transcript:
CDS:
Protein:

Top hits annotation

SpeciesTop HitsE-valueAnnotation

Gene family

Gene familySubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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PlantCyC

Enzyme ID Description Pathway Pathway id
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Gene Ontology

GO termDescriptionCategory
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Pfam Domain

Pfam accessionPfam nameAlignment startAlignment end
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Expression pattern

 1. Expression trend for Solyc03g095330.2 global RNA-seq network
 2. Expression trend for Solyc03g095330.2 tissue preferential conditional network
 3. Expression trend for Solyc03g095330.2 stress differential conditional network
 4. Expression trend for Solyc03g095330.2 in different samples during fruit ripening
TOP