Gene detail

Solyc06g061180.1's detail annotation

Phytozome annotation

	Polyketide cyclase/dehydrase and lipid transport superfamily protein

Polyketide cyclase/dehydrase and lipid transport superfamily protein

Network

Network Category	Global Network	Tissue Preferential Network	Stress differential network
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist	Top300 PCC genelist
PPI relationship	Solyc03g007230.2 Solyc03g096670.2 Solyc03g118710.2 Solyc03g118720.2 Solyc03g121880.2 Solyc05g052980.2 Solyc06g051940.2 Solyc11g005640.1
miRNA-target relationship	null

Functional module

Module ID	Function Annotation	Category
TreatCFM001130	aspartic-type endopeptidase activity thiamin salvage IV (yeast) Thiamine metabolism	Stress differential network

Location information

Gene	Assembly	Sources	Chr	Start	End	Strand
Solyc06g061180.1	SL2.40	phytozomev10	SL2.40ch06	35573953	35574594	+

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Sequences

Gene:
>Solyc06g061180.1
ATGGAGCAATCCGATAACTCAACGACCCACGTTCATCAGGAAGCAGAAGAAGAACCGAACCCGACCCATCAGTTCATGCTTCCTCCCGGTTTGACACCGGAAGAATCCGATGAGCTCAAATCAAGTGTAACCGACTTCCACTCCTACCAAGTCAACTCATCCCAATGTTCTTCTCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTCAAATTGAATCTTCAAAAATTAGCCTCCGTCGCCGAAGCCATAGCTCTTGGTGGTAACGGTGAGATCTCATAA
Transcript:
Solyc06g061180.1.1
ATGGAGCAATCCGATAACTCAACGACCCACGTTCATCAGGAAGCAGAAGAAGAACCGAACCCGACCCATCAGTTCATGCTTCCTCCCGGTTTGACACCGGAAGAATCCGATGAGCTCAAATCAAGTGTAACCGACTTCCACTCCTACCAAGTCAACTCATCCCAATGTTCTTCTCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTCAAATTGAATCTTCAAAAATTAGCCTCCGTCGCCGAAGCCATAGCTCTTGGTGGTAACGGTGAGATCTCATAA
CDS:
Solyc06g061180.1.1
ATGGAGCAATCCGATAACTCAACGACCCACGTTCATCAGGAAGCAGAAGAAGAACCGAACCCGACCCATCAGTTCATGCTTCCTCCCGGTTTGACACCGGAAGAATCCGATGAGCTCAAATCAAGTGTAACCGACTTCCACTCCTACCAAGTCAACTCATCCCAATGTTCTTCTCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTCAAATTGAATCTTCAAAAATTAGCCTCCGTCGCCGAAGCCATAGCTCTTGGTGGTAACGGTGAGATCTCATAA
Protein:
Solyc06g061180.1.1
MEQSDNSTTHVHQEAEEEPNPTHQFMLPPGLTPEESDELKSSVTDFHSYQVNSSQCSSLLAQRIHAPPHVVWPVVRRFEKPQIYKHFIKSCSVAENFSMVVGATRDVNVISGLPANTSTERLDLLDDEKYVTGFSIIGGEHRLKNYRSVTSVHGFERHGRIWTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLASVAEAIALGGNGEIS*

Top hits annotation

Species	Top Hits	E-value	Annotation
Arabidopsis thaliana	AT2G26040	2.00E-54	PYR1-like 2
Arabidopsis thaliana	AT4G17870	1.00E-79	PYRABACTIN RESISTANCE 1
Arabidopsis thaliana	AT5G46790	1.00E-70	PYR1-like 1
Nicotiana tabacum	gene_12099	5.00E-127	Abscisic acid receptor PYR1
Nicotiana tabacum	gene_7767	5.00E-127	Abscisic acid receptor PYR1
Nicotiana tabacum	gene_11258	5.00E-127	Abscisic acid receptor PYR1
Nicotiana benthamiana(v0.44)	NbS00018901g0005.1	1.00E-119	Abscisic acid receptor PYR1 (AHRD V1 **-- PYR1_ARATH)
Nicotiana benthamiana(v0.44)	NbS00030693g0002.1	1.00E-117	Abscisic acid receptor PYR1 (AHRD V1 **-- PYR1_ARATH)
Nicotiana benthamiana(v0.44)	NbS00012842g0001.1	3.00E-116	Abscisic acid receptor PYR1 (AHRD V1 **-- PYR1_ARATH)
Solanum tuberosum	PGSC0003DMP400003768	1.00E-115	Galactose oxidase
Solanum tuberosum	PGSC0003DMP400030588	5.00E-87	Gene of unknown function
Capsicum annuum	Capang00g005212	2E-97
Capsicum annuum	Capang01g000897	6E-81
Capsicum annuum	Capana06g001547	4.00E-98
Capsicum annuum	Capana01g001047	9.00E-81
Capsicum annuum	CA06g13200	2.00E-98	Abscisic acid receptor PYR1
Capsicum annuum	CA00g62890	9.00E-81	Abscisic acid receptor PYR1
Nicotiana benthamiana(v1.01)	Niben101Scf00104g00003.1	4.00E-94	Abscisic acid receptor PYR1
Nicotiana benthamiana(v1.01)	Niben101Scf01526g01001.1	6.00E-94	Abscisic acid receptor PYR1
Nicotiana benthamiana(v1.01)	Niben101Scf02731g00004.1	2.00E-83	Abscisic acid receptor PYR1
Solanum pennellii	Sopen06g021380.1	3.00E-123	Polyketide cyclase / dehydrase and lipid transport
Solanum pennellii	Sopen08g025540.1	4.00E-86	Polyketide cyclase / dehydrase and lipid transport
Petunia axillaris	Peaxi162Scf00615g00067.1	2.00E-96	Abscisic acid receptor PYR1
Petunia axillaris	Peaxi162Scf00460g00085.1	5.00E-78	Abscisic acid receptor PYR1
Petunia axillaris	Peaxi162Scf00136g00113.1	2.00E-53	Abscisic acid receptor PYR1
Petunia inflata	Peinf101Scf00787g02018.1	8.00E-98	Abscisic acid receptor PYR1
Petunia inflata	Peinf101Scf04901g00012.1	9.00E-58	Abscisic acid receptor PYR1
Petunia inflata	Peinf101Scf00030g02009.1	3.00E-53	Abscisic acid receptor PYR1

Gene family

Gene family	Subfamily
-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14496	abscisic acid receptor PYR1-like		Plant hormone signal transduction	sly04075

PlantCyC

Enzyme ID	Description	Pathway	Pathway id
-	-	-	-

Gene Ontology

GO term	Description	Category
-	-	-

Pfam Domain

Pfam accession	Pfam name	Alignment start	Alignment end
PF10604.5	Polyketide_cyc2	61	202

Expression pattern

1. Expression trend for Solyc06g061180.1 global RNA-seq network

2. Expression trend for Solyc06g061180.1 tissue preferential conditional network

3. Expression trend for Solyc06g061180.1 stress differential conditional network

4. Expression trend for Solyc06g061180.1 in different samples during fruit ripening

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