Solyc06g069700.2's detail annotation
Phytozome annotation
| Pentatricopeptide repeat (PPR) superfamily protein |
Network
Functional module
Location information
| Gene | Assembly | Sources | Chr | Start | End | Strand |
|---|
| Solyc06g069700.2 | SL2.40 | phytozomev10 | SL2.40ch06 | 39802023 | 39804709 | + |
Gene structure and chromatin state
Sequences
Top hits annotation
| Species | Top Hits | E-value | Annotation |
|---|
| Arabidopsis thaliana | AT2G02150 | 3.00E-86 | EMBRYO DEFECTIVE 2794 |
| Nicotiana tabacum | gene_10286 | 0.55 | Pentatricopeptide repeat-containing protein |
| Nicotiana benthamiana(v0.44) | NbS00009948g0002.1 | 0 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7MUK4_ARALY) |
| Solanum tuberosum | PGSC0003DMP400029750 | 4.00E-77 | Gene of unknown function |
| Solanum tuberosum | PGSC0003DMP400029748 | 4.00E-77 | Auxin-induced protein 5NG4 |
| Solanum tuberosum | PGSC0003DMP400002394 | 5.00E-77 | Homeobox protein |
| Capsicum annuum | Capang01g000592 | 0 | |
| Capsicum annuum | Capana01g000651 | 0 | |
| Capsicum annuum | CA06g18760 | 0 | Pentatricopeptide repeat-containing protein |
| Nicotiana benthamiana(v1.01) | Niben101Scf00245g02003.1 | 0 | Pentatricopeptide repeat-containing protein |
| Solanum pennellii | Sopen06g027000.1 | 0 | PPR repeat family |
| Petunia axillaris | Peaxi162Scf00013g00410.1 | 0 | Pentatricopeptide repeat-containing protein |
| Petunia inflata | Peinf101Scf03171g02003.1 | 2.00E-79 | Pentatricopeptide repeat-containing protein |
| Solanum melongena | Sme2.5_00298.1_g00017.1 | 0 | |
Gene family
KEGG pathway
| KO |
Enzyme |
Enzyme ID |
pathway |
mapID |
| - | - | - | - | - |
PlantCyC
| Enzyme ID |
Description |
Pathway |
Pathway id |
| - | - | - | - |
Gene Ontology
| GO term | Description | Category |
|---|
| - | - | - |
Pfam Domain
Expression pattern