Solyc06g073980.2's detail annotation
Phytozome annotation
| AP2/B3-like transcriptional factor family protein |
Network
Functional module
| Module ID | Function Annotation | Category |
|---|
| TissueCFM000651 | chromatin binding
Transcription_related, Transcription factor: B3
Transcription_related, Transcription regulator: PHD
| Tissue preferential network |
Location information
| Gene | Assembly | Sources | Chr | Start | End | Strand |
|---|
| Solyc06g073980.2 | SL2.40 | phytozomev10 | SL2.40ch06 | 42117163 | 42120125 | + |
Gene structure and chromatin state
Sequences
Top hits annotation
| Species | Top Hits | E-value | Annotation |
|---|
| Nicotiana tabacum | gene_12712 | 1.00E-29 | Unknown Protein |
| Nicotiana tabacum | gene_75529 | 1.00E-29 | Unknown Protein |
| Nicotiana tabacum | gene_77103 | 1.00E-20 | Unknown Protein |
| Capsicum annuum | Capang06g000604 | 2E-33 | |
| Solanum pennellii | Sopen06g030390.1 | 1.00E-78 | B3 DNA binding domain |
Gene family
KEGG pathway
| KO |
Enzyme |
Enzyme ID |
pathway |
mapID |
| - | - | - | - | - |
PlantCyC
| Enzyme ID |
Description |
Pathway |
Pathway id |
| - | - | - | - |
Gene Ontology
| GO term | Description | Category |
|---|
| GO:0003677 | DNA binding | molecular_function |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
Pfam Domain
| Pfam accession | Pfam name | Alignment start | Alignment end |
|---|
| PF02362.17 | B3 | 91 | 182 |
Expression pattern