Solyc06g084580.1's detail annotation
Phytozome annotation
| Pentatricopeptide repeat (PPR) superfamily protein |
Network
Functional module
Location information
| Gene | Assembly | Sources | Chr | Start | End | Strand |
|---|
| Solyc06g084580.1 | SL2.40 | phytozomev10 | SL2.40ch06 | 45940907 | 45943204 | - |
Gene structure and chromatin state
Sequences
Top hits annotation
| Species | Top Hits | E-value | Annotation |
|---|
| Nicotiana tabacum | gene_19238 | 0 | Pentatricopeptide repeat-containing protein |
| Nicotiana tabacum | gene_15409 | 3.00E-11 | Pentatricopeptide repeat-containing protein |
| Nicotiana tabacum | gene_69860 | 4.00E-10 | Pentatricopeptide repeat-containing protein |
| Nicotiana tabacum | gene_18560 | 0 | Pentatricopeptide repeat-containing protein |
| Nicotiana tabacum | gene_71646 | 0 | Pentatricopeptide repeat-containing protein |
| Nicotiana benthamiana(v0.44) | NbS00056966g0003.1 | 4.00E-112 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7L7Q9_ARALY) |
| Nicotiana benthamiana(v0.44) | NbS00056966g0004.1 | 0 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7L7Q9_ARALY) |
| Nicotiana benthamiana(v0.44) | NbS00045881g0007.1 | 3.00E-177 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7L7Q9_ARALY) |
| Capsicum annuum | Capang06g000019 | 0 | |
| Capsicum annuum | Capana06g000024 | 0 | |
| Capsicum annuum | CA06g27390 | 0 | Putative pentatricopeptide (PPR) repeat-containing protein |
| Nicotiana benthamiana(v1.01) | Niben101Scf19584g00016.1 | 0 | Pentatricopeptide repeat-containing protein |
| Nicotiana benthamiana(v1.01) | Niben101Scf03523g01024.1 | 2.00E-137 | Pentatricopeptide repeat-containing protein |
| Solanum pennellii | Sopen06g035950.1 | 0 | PPR repeat family |
| Petunia axillaris | Peaxi162Scf00140g00125.1 | 0 | Pentatricopeptide repeat-containing protein |
| Petunia inflata | Peinf101Scf02710g00007.1 | 6.00E-109 | Pentatricopeptide repeat (PPR) superfamily protein |
| Solanum melongena | Sme2.5_00810.1_g00019.1 | 0 | |
Gene family
KEGG pathway
| KO |
Enzyme |
Enzyme ID |
pathway |
mapID |
| - | - | - | - | - |
PlantCyC
| Enzyme ID |
Description |
Pathway |
Pathway id |
| - | - | - | - |
Gene Ontology
| GO term | Description | Category |
|---|
| - | - | - |
Pfam Domain
Expression pattern