Solyc07g049580.2's detail annotation
Phytozome annotation
| Ypt/Rab-GAP domain of gyp1p superfamily protein |
Network
Functional module
| Module ID | Function Annotation | Category |
|---|
| CFinderADM001283 | iron-sulfur cluster assembly
iron-sulfur cluster binding
| global network |
Location information
| Gene | Assembly | Sources | Chr | Start | End | Strand |
|---|
| Solyc07g049580.2 | SL2.40 | phytozomev10 | SL2.40ch07 | 57242622 | 57247236 | + |
Gene structure and chromatin state
Sequences
Top hits annotation
| Species | Top Hits | E-value | Annotation |
|---|
| Nicotiana tabacum | gene_7313 | 1.00E-115 | TBC1 domain family member 2 |
| Nicotiana tabacum | gene_86555 | 3.6 | TBC1 domain family member 2 |
| Nicotiana tabacum | gene_50733 | 0 | TBC1 domain family member 2 |
| Nicotiana tabacum | gene_50865 | 4.00E-171 | TBC1 domain family member 2 |
| Nicotiana tabacum | gene_12509 | 0 | TBC1 domain family member 2 |
| Nicotiana tabacum | gene_44069 | 8.00E-173 | TBC1 domain family member 2 |
| Nicotiana benthamiana(v0.44) | NbS00008116g0004.1 | 0 | TBC1 domain family member 2 (AHRD V1 **** Q5TBQ7_HUMAN) |
| Solanum tuberosum | PGSC0003DMP400024512 | 0 | H/ACA ribonucleoprotein complex subunit |
| Capsicum annuum | Capang07g001378 | 0 | |
| Capsicum annuum | Capang09g000474 | 0 | |
| Capsicum annuum | Capana07g001346 | 0 | |
| Capsicum annuum | Capana09g000541 | 0 | |
| Capsicum annuum | CA07g11130 | 0 | PREDICTED: TBC1 domain family member 2B-like [Solanum tuberosum] |
| Capsicum annuum | CA09g10490 | 0 | PREDICTED: TBC1 domain family member 2A-like [Cucumis sativus] |
| Nicotiana benthamiana(v1.01) | Niben101Scf12389g00005.1 | 0 | TBC1 domain family member 2A |
| Nicotiana benthamiana(v1.01) | Niben101Scf02543g02010.1 | 0 | TBC1 domain family member 2A |
| Nicotiana benthamiana(v1.01) | Niben101Scf08039g00008.1 | 0 | TBC1 domain family member 2A |
| Solanum pennellii | Sopen07g024980.1 | 0 | Rab-GTPase-TBC domain |
| Solanum pennellii | Sopen12g001880.1 | 0 | Rab-GTPase-TBC domain |
| Petunia axillaris | Peaxi162Scf01333g00145.1 | 0 | TBC1 domain family member 2A |
| Petunia axillaris | Peaxi162Scf00047g01920.1 | 0 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
| Petunia inflata | Peinf101Scf01180g02016.1 | 0 | TBC1 domain family member 2A |
| Petunia inflata | Peinf101Scf01775g04023.1 | 0 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
Gene family
KEGG pathway
| KO |
Enzyme |
Enzyme ID |
pathway |
mapID |
| - | - | - | - | - |
PlantCyC
| Enzyme ID |
Description |
Pathway |
Pathway id |
| - | - | - | - |
Gene Ontology
| GO term | Description | Category |
|---|
| GO:0005622 | intracellular | cellular_component |
Pfam Domain
| Pfam accession | Pfam name | Alignment start | Alignment end |
|---|
| PF00566.14 | RabGAP-TBC | 116 | 322 |
Expression pattern