Solyc08g074830.2's detail annotation
Phytozome annotation
| F-box/RNI-like superfamily protein |
Network
Functional module
| Module ID | Function Annotation | Category |
|---|
| TissueCFM000477 | protein domain specific binding
| Tissue preferential network |
Location information
| Gene | Assembly | Sources | Chr | Start | End | Strand |
|---|
| Solyc08g074830.2 | SL2.40 | phytozomev10 | SL2.40ch08 | 56128482 | 56130155 | + |
Gene structure and chromatin state
Sequences
Top hits annotation
| Species | Top Hits | E-value | Annotation |
|---|
| Nicotiana tabacum | gene_55597 | 1.00E-71 | F-box family protein |
| Nicotiana tabacum | gene_54912 | 8.00E-72 | F-box family protein |
| Nicotiana tabacum | gene_9963 | 2.00E-76 | F-box family protein |
| Nicotiana tabacum | gene_13458 | 2.00E-76 | F-box family protein |
| Nicotiana tabacum | gene_58880 | 4.00E-71 | F-box family protein |
| Nicotiana benthamiana(v0.44) | NbS00006798g0001.1 | 2.00E-73 | F-box family protein (AHRD V1 ***- D7KQH0_ARALY) |
| Capsicum annuum | Capang01g000998 | 2E-85 | |
| Capsicum annuum | Capang01g001000 | 2E-47 | |
| Capsicum annuum | Capana01g001147 | 9.00E-51 | |
| Capsicum annuum | CA00g49970 | 1.00E-48 | F-box/FBD/LRR-repeat protein |
| Nicotiana benthamiana(v1.01) | Niben101Scf00647g02008.1 | 2.00E-75 | F-box/RNI/FBD-like domain protein [Medicago truncatula] |
| Solanum pennellii | Sopen08g023420.1 | 0 | hypothetical protein |
| Solanum pennellii | Sopen08g023400.1 | 1.00E-142 | hypothetical protein |
| Solanum pennellii | Sopen08g023400.2 | 5.00E-142 | hypothetical protein |
| Petunia axillaris | Peaxi162Scf00445g00419.1 | 6.00E-100 | F-box/FBD/LRR-repeat protein |
| Petunia axillaris | Peaxi162Scf00445g00117.1 | 5.00E-95 | F-box/FBD/LRR-repeat protein |
| Petunia axillaris | Peaxi162Scf00445g00312.1 | 6.00E-95 | F-box/RNI-like superfamily protein |
| Petunia inflata | Peinf101Scf00068g01021.1 | 4.00E-101 | F-box/RNI-like superfamily protein |
| Petunia inflata | Peinf101Scf00068g03013.1 | 6.00E-99 | F-box/RNI-like superfamily protein |
| Petunia inflata | Peinf101Scf00068g02017.1 | 4.00E-96 | F-box/RNI-like superfamily protein |
| Solanum melongena | Sme2.5_00008.1_g00014.1 | 3.00E-70 | |
| Solanum melongena | Sme2.5_00270.1_g00010.1 | 2.00E-34 | |
| Solanum melongena | Sme2.5_02832.1_g00005.1 | 1.00E-24 | |
| Solanum melongena | Sme2.5_04463.1_g00008.1 | 3.00E-97 | |
| Solanum melongena | Sme2.5_10779.1_g00002.1 | 7.00E-73 | |
| Solanum melongena | Sme2.5_11995.1_g00001.1 | 6.00E-40 | |
Gene family
KEGG pathway
| KO |
Enzyme |
Enzyme ID |
pathway |
mapID |
| - | - | - | - | - |
PlantCyC
| Enzyme ID |
Description |
Pathway |
Pathway id |
| - | - | - | - |
Gene Ontology
| GO term | Description | Category |
|---|
| - | - | - |
Pfam Domain
| Pfam accession | Pfam name | Alignment start | Alignment end |
|---|
| PF08387.6 | FBD | 247 | 280 |
Expression pattern