Solyc08g079600.2's detail annotation

Phytozome annotation

Network

Network CategoryGlobal NetworkTissue Preferential NetworkStress differential network
Coexpression PositiveTop300 PCC genelistTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelistTop300 PCC genelist
PPI relationshipnull
miRNA-target relationshipnull

Functional module

Module IDFunction AnnotationCategory
TissueCFM000195glutathione metabolic process
gamma-glutamyltransferase activity
Transcription_related, Transcription regulator: HB
phytochelatins biosynthesis
UTP and CTP dephosphorylation II
pyrimidine deoxyribonucleotides de novo biosynthesis I
UTP and CTP dephosphorylation I
pyrimidine ribonucleotides interconversion
Glutathione metabolism
Tissue preferential network

Location information

GeneAssemblySourcesChrStartEndStrand
Solyc08g079600.2SL2.40phytozomev10SL2.40ch086026521760266636+

Gene structure and chromatin state

more details in UCSCdetails of chromatin state

Sequences

Gene:
Transcript:
CDS:
Protein:

Top hits annotation

SpeciesTop HitsE-valueAnnotation
Nicotiana tabacumgene_623301.00E-34Os02g0448600 protein (Fragment)
Nicotiana tabacumgene_619782.00E-34Os02g0448600 protein (Fragment)
Nicotiana tabacumgene_227154.00E-69Os02g0448600 protein (Fragment)
Nicotiana tabacumgene_305805.00E-68Os02g0448600 protein (Fragment)
Nicotiana benthamiana(v0.44)NbS00023991g0002.11.00E-69Os02g0448600 protein (Fragment) (AHRD V1 **-- Q0E1G8_ORYSJ)
Capsicum annuumCapang01g0003761E-41
Capsicum annuumCapang06g0015766E-32
Capsicum annuumCA01g041305.00E-48Unknown protein
Solanum pennelliiSopen08g027950.11.00E-69hypothetical protein
Petunia axillarisPeaxi162Scf00051g00215.13.00E-41conserved hypothetical protein [Ricinus communis] gb|EEF5113.1| conserved hypothetical protein [Ricinus communis]
Petunia axillarisPeaxi162Scf00271g00220.11.00E-40conserved hypothetical protein [Ricinus communis] gb|EEF5113.1| conserved hypothetical protein [Ricinus communis]
Petunia axillarisPeaxi162Scf00271g00039.13.00E-31
Petunia inflataPeinf101Scf00284g04015.13.00E-40conserved hypothetical protein

Gene family

Gene familySubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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PlantCyC

Enzyme ID Description Pathway Pathway id
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Gene Ontology

GO termDescriptionCategory
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Pfam Domain

Pfam accessionPfam nameAlignment startAlignment end
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Expression pattern

 1. Expression trend for Solyc08g079600.2 global RNA-seq network
 2. Expression trend for Solyc08g079600.2 tissue preferential conditional network
 3. Expression trend for Solyc08g079600.2 stress differential conditional network
 4. Expression trend for Solyc08g079600.2 in different samples during fruit ripening
TOP