Solyc09g008410.2's detail annotation

Phytozome annotation

Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

Network

Network CategoryGlobal NetworkTissue Preferential NetworkStress differential network
Coexpression PositiveTop300 PCC genelistTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelistTop300 PCC genelist
PPI relationshipSolyc00g053440.2  Solyc00g164680.1  Solyc00g257110.2  Solyc01g005030.2  Solyc01g005340.2  Solyc01g006050.2  Solyc01g006910.2  Solyc01g007960.2  
miRNA-target relationshipnull

Functional module

Module IDFunction AnnotationCategory
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Location information

GeneAssemblySourcesChrStartEndStrand
Solyc09g008410.2SL2.40phytozomev10SL2.40ch0918611451869636-

Gene structure and chromatin state

more details in UCSCdetails of chromatin state

Sequences

Gene:
Transcript:
CDS:
Protein:

Top hits annotation

SpeciesTop HitsE-valueAnnotation
Nicotiana tabacumgene_154373.00E-151Peptidyl-prolyl cis-trans isomerase
Nicotiana tabacumgene_100204.00E-151Peptidyl-prolyl cis-trans isomerase
Nicotiana tabacumgene_111203.00E-151Peptidyl-prolyl cis-trans isomerase
Nicotiana tabacumgene_56864.00E-151Peptidyl-prolyl cis-trans isomerase
Nicotiana tabacumgene_91894.00E-151Peptidyl-prolyl cis-trans isomerase
Nicotiana tabacumgene_146053.00E-151Peptidyl-prolyl cis-trans isomerase
Nicotiana benthamiana(v0.44)NbS00010073g0014.12.00E-120Peptidyl-prolyl cis-trans isomerase (AHRD V1 ***- D8SL30_SELML)
Nicotiana benthamiana(v0.44)NbS00004413g0003.13.00E-146Peptidyl-prolyl cis-trans isomerase (AHRD V1 ***- D8SL30_SELML)
Solanum tuberosumPGSC0003DMP4000069301.00E-133Transcription factor
Capsicum annuumCapang09g0017707E-123
Capsicum annuumCapang12g0011322E-92
Capsicum annuumCapang10g0008986E-86
Capsicum annuumCapana09g0022557.00E-123
Capsicum annuumCapana12g0013404.00E-94
Capsicum annuumCapana10g0018779.00E-64
Capsicum annuumCA10g155805.00E-102Cyclophilin-like peptidyl-prolyl cis-trans isomerase
Capsicum annuumCA09g018203.00E-94Cyclophilin-like peptidyl-prolyl cis-trans isomerase
Capsicum annuumCA00g980504.00E-94Cyclophilin-like peptidyl-prolyl cis-trans isomerase
Nicotiana benthamiana(v1.01)Niben101Scf00457g10012.14.00E-117Peptidyl-prolyl cis-trans isomerase D
Nicotiana benthamiana(v1.01)Niben101Scf06999g01001.14.00E-89Peptidyl-prolyl cis-trans isomerase D
Nicotiana benthamiana(v1.01)Niben101Scf02502g06013.13.00E-76Peptidyl-prolyl cis-trans isomerase-like 1
Solanum pennelliiSopen09g003230.16.00E-138Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Solanum pennelliiSopen10g033380.12.00E-104Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Petunia axillarisPeaxi162Scf00722g00412.13.00E-111Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Petunia axillarisPeaxi162Scf00311g01419.14.00E-58Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Petunia inflataPeinf101Scf01064g01014.12.00E-116Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Petunia inflataPeinf101Scf00487g16026.12.00E-103Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

Gene family

Gene familySubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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PlantCyC

Enzyme ID Description Pathway Pathway id
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Gene Ontology

GO termDescriptionCategory
GO:0003755peptidyl-prolyl cis-trans isomerase activitymolecular_function
GO:0006457protein foldingbiological_process

Pfam Domain

Pfam accessionPfam nameAlignment startAlignment end
PF00160.17Pro_isomerase83231

Expression pattern

 1. Expression trend for Solyc09g008410.2 global RNA-seq network
 2. Expression trend for Solyc09g008410.2 tissue preferential conditional network
 3. Expression trend for Solyc09g008410.2 stress differential conditional network
 4. Expression trend for Solyc09g008410.2 in different samples during fruit ripening
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