Solyc11g068400.1's detail annotation

Phytozome annotation

ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein

Network

Network CategoryGlobal NetworkTissue Preferential NetworkStress differential network
Coexpression PositiveTop300 PCC genelistTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelistTop300 PCC genelist
PPI relationshipnull
miRNA-target relationshipsly-miR9472-3p  

Functional module

Module IDFunction AnnotationCategory
CFinderADM000285protein import into mitochondrial matrix
mitochondrial electron transport, ubiquinol to cytochrome c
mitochondrial_respiratory_chain_complex_III
mitochondrial outer membrane translocase complex
mitochondrial inner membrane
UDP-D-xylose biosynthesis
Amino_sugar_and_nucleotide_sugar_metabolism
global network

Location information

GeneAssemblySourcesChrStartEndStrand
Solyc11g068400.1SL2.40phytozomev10SL2.40ch115022398950227276-

Gene structure and chromatin state

more details in UCSCdetails of chromatin state

Sequences

Gene:
Transcript:
CDS:
Protein:

Top hits annotation

SpeciesTop HitsE-valueAnnotation
Nicotiana benthamiana(v0.44)NbS00002847g0006.19.00E-30Ubiquinol-cytochrome C reductase (AHRD V1 ***- D6BQN0_9ROSI)
Nicotiana benthamiana(v0.44)NbS00000357g0017.14.00E-30Ubiquinol-cytochrome C reductase (AHRD V1 ***- D6BQN0_9ROSI)
Nicotiana benthamiana(v0.44)NbS00001625g0005.12.00E-38Ubiquinol-cytochrome C reductase (AHRD V1 ***- D6BQN0_9ROSI)
Nicotiana benthamiana(v0.44)NbS00008626g0001.14.00E-39Ubiquinol-cytochrome C reductase (AHRD V1 ***- D6BQN0_9ROSI)
Capsicum annuumCA00g919107.00E-31Unknown protein
Petunia axillarisPeaxi162Scf00003g00522.15.00E-31ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein

Gene family

Gene familySubfamily
--

KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00419cytochrome b-c1 complex subunit 9 Oxidative phosphorylation sly00190

PlantCyC

Enzyme ID Description Pathway Pathway id
----

Gene Ontology

GO termDescriptionCategory
GO:0008121ubiquinol-cytochrome-c reductase activitymolecular_function
GO:0006122mitochondrial electron transport, ubiquinol to cytochrome cbiological_process
GO:0005740mitochondrial envelopecellular_component

Pfam Domain

Pfam accessionPfam nameAlignment startAlignment end
PF05365.8UCR_UQCRX_QCR91563

Expression pattern

 1. Expression trend for Solyc11g068400.1 global RNA-seq network
 2. Expression trend for Solyc11g068400.1 tissue preferential conditional network
 3. Expression trend for Solyc11g068400.1 stress differential conditional network
 4. Expression trend for Solyc11g068400.1 in different samples during fruit ripening
TOP