Solyc12g027490.1's detail annotation

Phytozome annotation

Network

Network CategoryGlobal NetworkTissue Preferential NetworkStress differential network
Coexpression PositiveTop300 PCC genelistTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelistTop300 PCC genelist
PPI relationshipnull
miRNA-target relationshipnull

Functional module

Module IDFunction AnnotationCategory
CFinderADM000115telomere maintenance
DNA helicase activity
DNA repair
hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89
global network

Location information

GeneAssemblySourcesChrStartEndStrand
Solyc12g027490.1SL2.40phytozomev10SL2.40ch121724050817240906-

Gene structure and chromatin state

more details in UCSCdetails of chromatin state

Sequences

Gene:
Transcript:
CDS:
Protein:

Top hits annotation

SpeciesTop HitsE-valueAnnotation
Nicotiana tabacumgene_790626.00E-05Unknown Protein

Gene family

Gene familySubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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PlantCyC

Enzyme ID Description Pathway Pathway id
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Gene Ontology

GO termDescriptionCategory
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Pfam Domain

Pfam accessionPfam nameAlignment startAlignment end
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Expression pattern

 1. Expression trend for Solyc12g027490.1 global RNA-seq network
 2. Expression trend for Solyc12g027490.1 tissue preferential conditional network
 3. Expression trend for Solyc12g027490.1 stress differential conditional network
 4. Expression trend for Solyc12g027490.1 in different samples during fruit ripening
TOP