Gene detail

Solyc12g036410.1's detail annotation

Phytozome annotation

	Translation elongation factor EF1A/initiation factor IF2gamma family protein

Translation elongation factor EF1A/initiation factor IF2gamma family protein

Network

Network Category	Global Network	Tissue Preferential Network	Stress differential network
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist	Top300 PCC genelist
PPI relationship	null
miRNA-target relationship	null

Functional module

Module ID	Function Annotation	Category
CFinderADM000675	GTP binding formation of glycosidic bonds, GlycosylTransferases: GTnc	global network

Location information

Gene	Assembly	Sources	Chr	Start	End	Strand
Solyc12g036410.1	SL2.40	phytozomev10	SL2.40ch12	31125740	31133201	+

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Sequences

Gene:
>Solyc12g036410.1
ATGAATGTATGTGATGTATGTGGAAATCCGAAACAAGAACTAGTTAAGGCTGGGGTGTGGTGTTGTCCTATTTGCACATTTGATAATGAAGATACCACAAATTTATGTGATATGTGTGGCGTCCTGCGTAATCCATTGATCAAAGGCGGCGGTGGCAAAGCTAGCGCAGGTTAGCAACTGGCTATATGTCTCCTACAGATTTCACATTGATTCACAAACAATTTTCTTTTGGGGGTTGGAAAGAACTGTTTCTGACTTTCTGTAGATAATGTTTTTGTTGCATTTTGTTTCTCCTTGCATATTTTCCTCCCCTCAATAGATAGTAATAAATAATGTGGTGGTAAATTTGGTTGTGGGAGTTCTCCTTTTTGTTCTGGTTACTCGATTTTAAGACGTCATCAATGGTCCTTATGCAAATATCTTGTATCATCTATTGACATGGTACTTATATTTTCCCAATTTAGGTAGTTCTTAGTGAATTTCCCTTGCTTCTCCAGAGAGTAAATTATTTCCTTCAATTGGTAGCATATGCATAGTTTCTATGGTGTCTATAAAGTCCAAGTTTGTACTTGCATCATGTCGCATTGGAAATCAAAATGCTGTTCACTTTGAAGCACAGAACTATAAGAAAAAAAAAGAGGACCGTTAACTTCGACGAGCTTTGATATATTTGTGGTACACAAAGTCAAGAGGTAGGGTGGTTTAGTTATTACATTTTGGATGCATGGGGAACTATTGGTAGTGATCAGACAAATTAATTTTTAATAGCTGACCTTTATCAAGAAGGACAGTATTAGCCCAATTTTCCAATGTCAGGGGTGGCCTCAACAATTAATGGGGAGCAATGTTAGACCATCTTACATGATTCAATCACAATTTGGTCTTTTTTCCGTGCCAATTTAAAAAGCTTTCTTTTGTGTGGAAGTACAAAGTCTTAAGGATGAATCTTGAGTTAGAAATGATAGGTTAATTTGCATGTTAGTCCTAGAAAAGAAGTCATTAAACTTATCTCCACTTCAGCATGAAACTTCTACTAGTTGGGAAATATGATTCTTAAAGTGTGCTTGTTGATTGTTTTAATCAATTAACACAACTTTAGGAGATCTTATTTTCCTTTTCCTAGCGTAATCATTTTATTTTTTGTTCGGACAATAGTAATGTGGTAATCCTGTATTTCAGGGAAACTACTAAGTTTTAAAAAAAATAATCTTCTATTACCGGGGACCTTCAAAAGTAGTAACAGAAAAAGTAATTCTTAAAGAGATCTTGAAAAATCTACAAGCTGTTCTGTTTCCTCTAAACCTGTTTCTTTACACCAAAAACAAATAGATACAATACAATCCACTTAAACTTTTGAATGGAATTGGAAATATCTTTATAATTTCTTCTATTCCTCTCTCTCCAAACTCTCTACCATATGCAGTGTGGGGTTATTCTCCACCATGCCTTCTGGTCCTCCTCTTCAAATGCAACAACTCAACAAATCTGCAGTATGCTGAGGCATAATAATTCGTGAATGGATAATGACACAAATATATGGATAAAAGATTTGGTGTTTATCTAGAATTCAATGGAATAATCCATTAAACTAGTTGTCCCTACACTTATGCACAACATGAGCTAACTAGAAGGGAAAAATAGGCATTTGTTTGAAATGACAAGATCTTTTATGTTTACCATGAATCTACCAAAGGACGAGCTACTGGGGATGTCATTCTAGTTGTTGTCAATCTTATCAATAGAAATGCCACTTTAAATTTCAATTTATAGAGTCCGGTGAGAATAAATATATTGTTCCTCTAAAGTTGTTTGGGTGTGTATTTTGTTCACACTAGGAATTTTGGCAAACCTGGTCCCAAAGCCTTTAAGTGTGTCTTTTATAGGTGTTCTCCAACACAGAATTGGAATATATGCTCCCTAGGGATTTATTTCAGCATGAATCCTCTTTGAGAGTTGGATTCCTATTTCAATATTACACCATCACTTCTTCAAGAGAAGAGCAATAAGGAGGAAGAGAGATGATTCTTCTCGATTCCACTGTTGAAACCACTACCACAGGGTAAGTGAAGTTGGAGAAAGAATTAGGGAGATATTGTTGGGCGTTTGGAGCTCATTCACATTGCCGGTCCCAAGCCCAGATAAAGGAGAAGGGATACTGAGGGTCAATTGAAAACCACCTCTACTTCATAAAGGTGGAGAGAAGATGCGTATGGTTTACCCTCCCAGACTTATTTTTGGGATTAATTTGTTGTTGTTATTGTTGGGGGTTTGGATAGGCCTAATTTGATAACTTACTTAATGAGAAATAGAGTAGCAAAGTGGCTCATGCAATCTACCGAAGCTGAATTTTTTTATCACGATCCAAAAATCAAAAAGACGTGACGACACCCACACCTTATCCTATTGGTGAACGCTTATCCAATTCTAGTCCATTTTTAACATTTTAGCGAAAATATAAAGGTAAAAAGACAAAATAAGTCATAACTGATCTCTTAATCATAAAGTGCGAAAAGTAACAAAATATAACCCAAAACCTAGTGTTGTAGATACAAGAGCCTCTAAAAAGTATACAAGTCTTAAAATAACAAAGTACTGTTGGTGTTGTTGTCACTACCAGAAACTTGAGTCAGATAGCTCCTACTATAAGCCACGAGTAGGTAAGTCAACCCTAATCTGGAACAACAAAGTGTGTACAAGGAAGAAACAATACCGACAAGCATAAGAATAGCAATTCAACAGATACAATGGGAGAAAAGAACCGAAGAAGAGAAAACAAGTGACTAACAAATGTAGAGGCTAGCCGCCCAGGCCTTCGCGAACGTGGTAGCTTGCCCATGATCGCACAAGGCAACTCACCAGGCCTCCGCTAATGCGGCTTAGGCCTCACTAATGGGAGATCAATACCATTGGTGATTGTGAACGCGACTAGGAGCCCACAATCGTGAAGAGGAAAATTAGGCTGCACCAGCTTGATGCACATCAGCTGGTTTTGCCCAACTTGAAAATCCCCAATAGGGTTCTCGAGATTCTTTTGAACCCCATGCACACAAAGGATATATGTTACCCCGCCAACTTCGGCATTCCGGACTCAACGGAGGTGTTGGAATTTCAACCGAGATCGTTTCTGACAAAAAGTGGATCCCACACCGAACCCCGTTTAAAGCCAAATTACACAAGGGGGCTCAGGATGAGCCCAAAAGCCTCGGGATCCACACCAAAGATCCTTCTAAACCAAATCATTCCGAAGCTAACGGAACTGTCAGATTGCATTCTAAGGCCGTCTTTCTGAACTTTTGACCGAAGTCGACCGTTTAAGTTTCAAAACCTCCAAAATACAGAAACTTGCACAAAATTTTAAAGAACGACCAAGTGACCGCACTATCAGTCCTAACAGGTCATAAATGTTTTTGGATTGCTATAGGAATTCTCTAAACGACGAAAGGAAGTCAATAACACAAAAAGAAATGACCAGGATGGTCATTACAATATCCACTACCAAAAAGGAAGGCAAGAACACAGAAATGCCTTTTGTCTTTTAATTTTCTCACTCAGATGAAATTATGTTGGTTCACTTGGTTCATTTCCTTTCCTTGTCTCCCTTTCCAGTTTAACATTATTTAATCCTTCAAAATTTTCCTCCTTTGTCCTGATTTTCTTGGATAGCTCTTCATGAAGTCCCTATTCCATATTCATAATGAAGTAGAAACTACACAGATTATTCAGTGGCCATATTATGTATCTTCGTGACTTTGTCCTAATTTTTTATTAGAATCTTTAGGGGGTGCTTTCTAGGACCATGTTCATTGGCTGTAATTTCGTTATTTGGGGGCATTAACTATATACCTGTTCAATGACACCTCCCTGCAAACTTTTCTTCATTTTTTTTAGTATTTTTTTATTGGTGAAACTATTTACCTGTTTAGTGGAACCTTCCTGCTGACTTTTCTTCCCTTTTTGTCATTGAGAATGTAGAGTAGATTGAAACTGAAATTTTTATGCACTGACTTTTGGCAATTTCCCTCCCTAATTCATATGCAGAAAGATGCCACCTTTTATAGTACCTCTCCAATAATACCAACAAAAAATACGTAGTCTTAATTCCTAATATTTTATATCCTGTTCTCTATTTTGAGAGCTTGACATCTTTCGTGTACATTACTGTTCCTTTTGCAGCAACTAGCGACAAAGTCGAACAGTCAAATGTTAGTAAAAAGGAAATAGCTGGCGAAGTTAAAAAAGAATTGGTTTCTGAAGAGCCTACTAGCTCTTCTGCATCAACAGCGAAGGTTAGACGTGATAATATGAAGGATAGAGGTTCTTCTATAAAATCTAGAGGATATCATGGCGTCATGAGCAATGTGGGCAATATGTCTGTATCATCAAATCCTCGCAATGCGGAGAGTAGAATTGCACCTTCAAGATCACAGACTAAACCTCAGAAAATTGTATGCACTGATCAATTAGAAGACAAACTGAACCAGCTAAATCTTGCAATCGTGAGTCAAAACATTTATGTGATTCAAGATGTCAAACATTTAGAATGTCTAATCCGCTGATCTTACTCCAAAAGTTTCACAATGTAGGTTGGCCATGTTGATTCTGGGAAGTCAACACTGTCAGGAAGACTACTACACCTTTTGGGGCAGATATCTCAGAAGGAAATGCACAAATATGAAAAAGAGGCCAAGCAGCAAGTAATCTTTCTGTTCGCTTTTTATCCATTTTGTTAGGACATTGTCAAATCTTGATTAGCTGATTGATACATATCCTATCTATAATCAGGGAAAAGGGTCCTTTGCTTATGCTTGGGCTTTGGATGAGAGTGCTGAGGAAAGAGAGAGAGGAATAACTATGACAGTGGCTGTTGCCTACTTTAACACAAAAAGTTACCGCGTTGTACTGCTTGATTCCCCAGGCCATAGAGACTTTGTCCCAAATATGATATCAGGTGCAACACAAGCGGATGCTGCCATTCTTGTAGTTGATGCTTCAATAGGTGCATTTGAAGCTGGCATTGATGTTAGTGGAGGTCAGACAAGGGAGCATGCACAACTTATCAAAAGCTTTGGGGTGGATCAGATAATAATTGCTATTAACAAAATGGATGTAGTGGGATACTCCAAAGAACGGTTTGATACAATTAAGAATCAACTAGGAACATTTCTCCGGGCTTGTAAGTTTAAAGATTCATTAGTATTGTGGATTCCCCTGAGCGCCATGGAAAACCAAAATTTGGTGACAAGTCCTTCTGATGCAAGATTGTTGTCCTGGTTAGTTTACTGGCAACTGCTAGCGTTACTTGGAAGCATAGTGTGACTCACTGTCTTCAACTTTATCACGTTTGTCGTTTAGAAGAAAATGCTTTCATAGAAGTTTTATGATTGCCTGAGGCAGAACAGTAGAACAGTAGGTTACTTAAAAAAGATATAAGTTAAACTGAATGCAATTGGAAATGAAACATTTAAAGTCTTCTCAAGATTGACAAACCAAATTTGCGAGCTAGTAGATAAAATGATGATTGTGCTGTTGAGTCAAAATTTCTGTGGTAATTTAGTGTCATGCACAAATAGCTCGCGAAGCCCCCATTGTCTTTTGTAGATAATACTGAAGGTTTATTTCAGGTTTCAAGGTCCATGCCTTTTAGACGCCATAGACTCTCTCCAACCTCCCCAGAGAGATTACTCGAAGCCTATATTAATGCCGATATGTGATCTCGTTAAATTACCCTCACAAGGACAGGTGTCAGTATGTGGGAAGTTGGAGACAGGAGCTCTTCAAACTGGAGATAAGGTACTCAATTACCCGCTAATGCAAGAGAGATCCTTCTCCTTTTTTTTTGACCCTCAACATTTAAATTCTTCAAGTATCATATCTAGAACAAGATACTTCTTTATGATATACATGTTTTTAGAGGGCTTGAACTTTTAGAGTAATAACTGTACAGGGAGTTATACCGGTGCCTATAGATCATGTCATCAGTCTGACCATCACCCAGATTTACCTGCCAAAATACCGTGCTGTCATTAGGAGGGGCTGAATGAGGCATTAAGCAACTAAACTTGTATCCTAATTTTCTATCAAGTTGCTACTACATTTTTTTCTCCGAGTGTAACTTTTTTCGTACTGTATATGCTAAAGTATTTTGAATTTTATTTGGGGTGTGTTTGTTTTGAGGGGATGGGAGTTCAAGACAGTTGTTGTTTGAGCTAGGCTTTGCATGGATTGAAACCTGAGGTGGTTTTGATTACTTCAATGTTTTATGTCTTTCTTTCATGTCTTGGAAGGAACATCTGCACATTGACAATAATGAGATAGGTACACGGTGAAACACAAAGACACTTCTTTTTCTCCCTGTTGTGTAAGATACCGTGACTTAGAGTATAAGGGCTCAAGTTAACAGAGTGATAGATATAAAGTGGACTAAGATTACTAACAGATACTTGTGCAGTCATCTTGTTAGGGATTTGTTGGGACATGCTGTTAGGTTATTACTGCAATTGTGATCATAATGCTTGTACAGTGCAGTCATCTAGTGGACAGTAATTATTTAACATTATCAATAAATGCGCCATTGGTGATATTTTTGTTATGTGGATTATTTTTTTTTATTCTACAAGATTTGACCTTGTAACAAGAATGGAAATTCGTTGACTTTTTTTGGAAGGATAATAGTCTTTCCTAACGCTAAATTCTTAACATGGCCAGGTTCTAGTTATTCCATCAAGAGAAATGGCAACTGTGCGTTCTTTGGAACATAATTCTCAGGTTTGTAACAGTGCAAAAGCTGGAGATAATGTCACTGTTAATCTACAAGGTATAGATGTGAATCGTGTAATGGCAGGGGATGTGCTGTGCCACCCTGAATATCCTATTGCTGTTACAAATCATTTGGAACTGAAGATTCTTCTCCTGGATATTGCTGTTCCAATTTTAATTGGGTCTCAGGTAGCAGCTCTTGTCATTTTACATCAAAATTGAGAGTTGCATGACATCTGTTTCTAGCTAATAACTCAAGAGCTCTGAATATTTGAAAATGTGCAGTTGGAATTTCATGTACACCATGTTAAGGAGGCTGCAAGAGTTGTGAGGATTTTGTCCTTGCTTGATCCAAAGACTGGAAAGGAGACCAAGAAATCACCTAGATGTCTTCTAGCAAAGCAGAATGCTATAATTGAGGTTTCTCTCAAGAGCAACTATATGTCTATTGATATGCTTATATTTTATCGTTTTAGTAAATATGTATTAAAAAAATGTCTTTGGTGGGAATGGGTGCAGGGAAGATGCTAGCTATAAAAGAGATCTCAACTTTAATTTGTTTGTCATGGATCAGGTAGTTTTGCAAGGGATAATTTGTGTTGAAGAGCATTCTAAATGTAAGGGTCTTGGAAGGGTGTCCCTCAGAGCATCAGGAAGAACCATCGCTCTTGGTCTTGTGACTAGAGTTCTAGAGAAGAAGGAATAG
Transcript:
Solyc12g036410.1.1
ATGAATGTATGTGATGTATGTGGAAATCCGAAACAAGAACTAGTTAAGGCTGGGGTGTGGTGTTGTCCTATTTGCACATTTGATAATGAAGATACCACAAATTTATGTGATATGTGTGGCGTCCTGCGTAATCCATTGATCAAAGGCGGCGGTGGCAAAGCTAGCGCAGCAACTAGCGACAAAGTCGAACAGTCAAATGTTAGTAAAAAGGAAATAGCTGGCGAAGTTAAAAAAGAATTGGTTTCTGAAGAGCCTACTAGCTCTTCTGCATCAACAGCGAAGGTTAGACGTGATAATATGAAGGATAGAGGTTCTTCTATAAAATCTAGAGGATATCATGGCGTCATGAGCAATGTGGGCAATATGTCTGTATCATCAAATCCTCGCAATGCGGAGAGTAGAATTGCACCTTCAAGATCACAGACTAAACCTCAGAAAATTGTATGCACTGATCAATTAGAAGACAAACTGAACCAGCTAAATCTTGCAATCGTTGGCCATGTTGATTCTGGGAAGTCAACACTGTCAGGAAGACTACTACACCTTTTGGGGCAGATATCTCAGAAGGAAATGCACAAATATGAAAAAGAGGCCAAGCAGCAAGGAAAAGGGTCCTTTGCTTATGCTTGGGCTTTGGATGAGAGTGCTGAGGAAAGAGAGAGAGGAATAACTATGACAGTGGCTGTTGCCTACTTTAACACAAAAAGTTACCGCGTTGTACTGCTTGATTCCCCAGGCCATAGAGACTTTGTCCCAAATATGATATCAGGTGCAACACAAGCGGATGCTGCCATTCTTGTAGTTGATGCTTCAATAGGTGCATTTGAAGCTGGCATTGATGTTAGTGGAGGTCAGACAAGGGAGCATGCACAACTTATCAAAAGCTTTGGGGTGGATCAGATAATAATTGCTATTAACAAAATGGATGTAGTGGGATACTCCAAAGAACGGTTTGATACAATTAAGAATCAACTAGGAACATTTCTCCGGGCTTGTAAGTTTAAAGATTCATTAGTATTGTGGATTCCCCTGAGCGCCATGGAAAACCAAAATTTGGTGACAAGTCCTTCTGATGCAAGATTGTTGTCCTGGTTTCAAGGTCCATGCCTTTTAGACGCCATAGACTCTCTCCAACCTCCCCAGAGAGATTACTCGAAGCCTATATTAATGCCGATATGTGATCTCGTTAAATTACCCTCACAAGGACAGGTGTCAGTATGTGGGAAGTTGGAGACAGGAGCTCTTCAAACTGGAGATAAGGTTCTAGTTATTCCATCAAGAGAAATGGCAACTGTGCGTTCTTTGGAACATAATTCTCAGGTTTGTAACAGTGCAAAAGCTGGAGATAATGTCACTGTTAATCTACAAGGTATAGATGTGAATCGTGTAATGGCAGGGGATGTGCTGTGCCACCCTGAATATCCTATTGCTGTTACAAATCATTTGGAACTGAAGATTCTTCTCCTGGATATTGCTGTTCCAATTTTAATTGGGTCTCAGTTGGAATTTCATGTACACCATGTTAAGGAGGCTGCAAGAGTTGTGAGGATTTTGTCCTTGCTTGATCCAAAGACTGGAAAGGAGACCAAGAAATCACCTAGATGTCTTCTAGCAAAGCAGAATGCTATAATTGAGGTAGTTTTGCAAGGGATAATTTGTGTTGAAGAGCATTCTAAATGTAAGGGTCTTGGAAGGGTGTCCCTCAGAGCATCAGGAAGAACCATCGCTCTTGGTCTTGTGACTAGAGTTCTAGAGAAGAAGGAATAG
CDS:
Solyc12g036410.1.1
ATGAATGTATGTGATGTATGTGGAAATCCGAAACAAGAACTAGTTAAGGCTGGGGTGTGGTGTTGTCCTATTTGCACATTTGATAATGAAGATACCACAAATTTATGTGATATGTGTGGCGTCCTGCGTAATCCATTGATCAAAGGCGGCGGTGGCAAAGCTAGCGCAGCAACTAGCGACAAAGTCGAACAGTCAAATGTTAGTAAAAAGGAAATAGCTGGCGAAGTTAAAAAAGAATTGGTTTCTGAAGAGCCTACTAGCTCTTCTGCATCAACAGCGAAGGTTAGACGTGATAATATGAAGGATAGAGGTTCTTCTATAAAATCTAGAGGATATCATGGCGTCATGAGCAATGTGGGCAATATGTCTGTATCATCAAATCCTCGCAATGCGGAGAGTAGAATTGCACCTTCAAGATCACAGACTAAACCTCAGAAAATTGTATGCACTGATCAATTAGAAGACAAACTGAACCAGCTAAATCTTGCAATCGTTGGCCATGTTGATTCTGGGAAGTCAACACTGTCAGGAAGACTACTACACCTTTTGGGGCAGATATCTCAGAAGGAAATGCACAAATATGAAAAAGAGGCCAAGCAGCAAGGAAAAGGGTCCTTTGCTTATGCTTGGGCTTTGGATGAGAGTGCTGAGGAAAGAGAGAGAGGAATAACTATGACAGTGGCTGTTGCCTACTTTAACACAAAAAGTTACCGCGTTGTACTGCTTGATTCCCCAGGCCATAGAGACTTTGTCCCAAATATGATATCAGGTGCAACACAAGCGGATGCTGCCATTCTTGTAGTTGATGCTTCAATAGGTGCATTTGAAGCTGGCATTGATGTTAGTGGAGGTCAGACAAGGGAGCATGCACAACTTATCAAAAGCTTTGGGGTGGATCAGATAATAATTGCTATTAACAAAATGGATGTAGTGGGATACTCCAAAGAACGGTTTGATACAATTAAGAATCAACTAGGAACATTTCTCCGGGCTTGTAAGTTTAAAGATTCATTAGTATTGTGGATTCCCCTGAGCGCCATGGAAAACCAAAATTTGGTGACAAGTCCTTCTGATGCAAGATTGTTGTCCTGGTTTCAAGGTCCATGCCTTTTAGACGCCATAGACTCTCTCCAACCTCCCCAGAGAGATTACTCGAAGCCTATATTAATGCCGATATGTGATCTCGTTAAATTACCCTCACAAGGACAGGTGTCAGTATGTGGGAAGTTGGAGACAGGAGCTCTTCAAACTGGAGATAAGGTTCTAGTTATTCCATCAAGAGAAATGGCAACTGTGCGTTCTTTGGAACATAATTCTCAGGTTTGTAACAGTGCAAAAGCTGGAGATAATGTCACTGTTAATCTACAAGGTATAGATGTGAATCGTGTAATGGCAGGGGATGTGCTGTGCCACCCTGAATATCCTATTGCTGTTACAAATCATTTGGAACTGAAGATTCTTCTCCTGGATATTGCTGTTCCAATTTTAATTGGGTCTCAGTTGGAATTTCATGTACACCATGTTAAGGAGGCTGCAAGAGTTGTGAGGATTTTGTCCTTGCTTGATCCAAAGACTGGAAAGGAGACCAAGAAATCACCTAGATGTCTTCTAGCAAAGCAGAATGCTATAATTGAGGTAGTTTTGCAAGGGATAATTTGTGTTGAAGAGCATTCTAAATGTAAGGGTCTTGGAAGGGTGTCCCTCAGAGCATCAGGAAGAACCATCGCTCTTGGTCTTGTGACTAGAGTTCTAGAGAAGAAGGAATAG
Protein:
Solyc12g036410.1.1
MNVCDVCGNPKQELVKAGVWCCPICTFDNEDTTNLCDMCGVLRNPLIKGGGGKASAATSDKVEQSNVSKKEIAGEVKKELVSEEPTSSSASTAKVRRDNMKDRGSSIKSRGYHGVMSNVGNMSVSSNPRNAESRIAPSRSQTKPQKIVCTDQLEDKLNQLNLAIVGHVDSGKSTLSGRLLHLLGQISQKEMHKYEKEAKQQGKGSFAYAWALDESAEERERGITMTVAVAYFNTKSYRVVLLDSPGHRDFVPNMISGATQADAAILVVDASIGAFEAGIDVSGGQTREHAQLIKSFGVDQIIIAINKMDVVGYSKERFDTIKNQLGTFLRACKFKDSLVLWIPLSAMENQNLVTSPSDARLLSWFQGPCLLDAIDSLQPPQRDYSKPILMPICDLVKLPSQGQVSVCGKLETGALQTGDKVLVIPSREMATVRSLEHNSQVCNSAKAGDNVTVNLQGIDVNRVMAGDVLCHPEYPIAVTNHLELKILLLDIAVPILIGSQLEFHVHHVKEAARVVRILSLLDPKTGKETKKSPRCLLAKQNAIIEVVLQGIICVEEHSKCKGLGRVSLRASGRTIALGLVTRVLEKKE*

Gene:

>Solyc12g036410.1

ATGAATGTATGTGATGTATGTGGAAATCCGAAACAAGAACTAGTTAAGGCTGGGGTGTGGTGTTGTCCTATTTGCACATTTGATAATGAAGATACCACAAATTTATGTGATATGTGTGGCGTCCTGCGTAATCCATTGATCAAAGGCGGCGGTGGCAAAGCTAGCGCAGGTTAGCAACTGGCTATATGTCTCCTACAGATTTCACATTGATTCACAAACAATTTTCTTTTGGGGGTTGGAAAGAACTGTTTCTGACTTTCTGTAGATAATGTTTTTGTTGCATTTTGTTTCTCCTTGCATATTTTCCTCCCCTCAATAGATAGTAATAAATAATGTGGTGGTAAATTTGGTTGTGGGAGTTCTCCTTTTTGTTCTGGTTACTCGATTTTAAGACGTCATCAATGGTCCTTATGCAAATATCTTGTATCATCTATTGACATGGTACTTATATTTTCCCAATTTAGGTAGTTCTTAGTGAATTTCCCTTGCTTCTCCAGAGAGTAAATTATTTCCTTCAATTGGTAGCATATGCATAGTTTCTATGGTGTCTATAAAGTCCAAGTTTGTACTTGCATCATGTCGCATTGGAAATCAAAATGCTGTTCACTTTGAAGCACAGAACTATAAGAAAAAAAAAGAGGACCGTTAACTTCGACGAGCTTTGATATATTTGTGGTACACAAAGTCAAGAGGTAGGGTGGTTTAGTTATTACATTTTGGATGCATGGGGAACTATTGGTAGTGATCAGACAAATTAATTTTTAATAGCTGACCTTTATCAAGAAGGACAGTATTAGCCCAATTTTCCAATGTCAGGGGTGGCCTCAACAATTAATGGGGAGCAATGTTAGACCATCTTACATGATTCAATCACAATTTGGTCTTTTTTCCGTGCCAATTTAAAAAGCTTTCTTTTGTGTGGAAGTACAAAGTCTTAAGGATGAATCTTGAGTTAGAAATGATAGGTTAATTTGCATGTTAGTCCTAGAAAAGAAGTCATTAAACTTATCTCCACTTCAGCATGAAACTTCTACTAGTTGGGAAATATGATTCTTAAAGTGTGCTTGTTGATTGTTTTAATCAATTAACACAACTTTAGGAGATCTTATTTTCCTTTTCCTAGCGTAATCATTTTATTTTTTGTTCGGACAATAGTAATGTGGTAATCCTGTATTTCAGGGAAACTACTAAGTTTTAAAAAAAATAATCTTCTATTACCGGGGACCTTCAAAAGTAGTAACAGAAAAAGTAATTCTTAAAGAGATCTTGAAAAATCTACAAGCTGTTCTGTTTCCTCTAAACCTGTTTCTTTACACCAAAAACAAATAGATACAATACAATCCACTTAAACTTTTGAATGGAATTGGAAATATCTTTATAATTTCTTCTATTCCTCTCTCTCCAAACTCTCTACCATATGCAGTGTGGGGTTATTCTCCACCATGCCTTCTGGTCCTCCTCTTCAAATGCAACAACTCAACAAATCTGCAGTATGCTGAGGCATAATAATTCGTGAATGGATAATGACACAAATATATGGATAAAAGATTTGGTGTTTATCTAGAATTCAATGGAATAATCCATTAAACTAGTTGTCCCTACACTTATGCACAACATGAGCTAACTAGAAGGGAAAAATAGGCATTTGTTTGAAATGACAAGATCTTTTATGTTTACCATGAATCTACCAAAGGACGAGCTACTGGGGATGTCATTCTAGTTGTTGTCAATCTTATCAATAGAAATGCCACTTTAAATTTCAATTTATAGAGTCCGGTGAGAATAAATATATTGTTCCTCTAAAGTTGTTTGGGTGTGTATTTTGTTCACACTAGGAATTTTGGCAAACCTGGTCCCAAAGCCTTTAAGTGTGTCTTTTATAGGTGTTCTCCAACACAGAATTGGAATATATGCTCCCTAGGGATTTATTTCAGCATGAATCCTCTTTGAGAGTTGGATTCCTATTTCAATATTACACCATCACTTCTTCAAGAGAAGAGCAATAAGGAGGAAGAGAGATGATTCTTCTCGATTCCACTGTTGAAACCACTACCACAGGGTAAGTGAAGTTGGAGAAAGAATTAGGGAGATATTGTTGGGCGTTTGGAGCTCATTCACATTGCCGGTCCCAAGCCCAGATAAAGGAGAAGGGATACTGAGGGTCAATTGAAAACCACCTCTACTTCATAAAGGTGGAGAGAAGATGCGTATGGTTTACCCTCCCAGACTTATTTTTGGGATTAATTTGTTGTTGTTATTGTTGGGGGTTTGGATAGGCCTAATTTGATAACTTACTTAATGAGAAATAGAGTAGCAAAGTGGCTCATGCAATCTACCGAAGCTGAATTTTTTTATCACGATCCAAAAATCAAAAAGACGTGACGACACCCACACCTTATCCTATTGGTGAACGCTTATCCAATTCTAGTCCATTTTTAACATTTTAGCGAAAATATAAAGGTAAAAAGACAAAATAAGTCATAACTGATCTCTTAATCATAAAGTGCGAAAAGTAACAAAATATAACCCAAAACCTAGTGTTGTAGATACAAGAGCCTCTAAAAAGTATACAAGTCTTAAAATAACAAAGTACTGTTGGTGTTGTTGTCACTACCAGAAACTTGAGTCAGATAGCTCCTACTATAAGCCACGAGTAGGTAAGTCAACCCTAATCTGGAACAACAAAGTGTGTACAAGGAAGAAACAATACCGACAAGCATAAGAATAGCAATTCAACAGATACAATGGGAGAAAAGAACCGAAGAAGAGAAAACAAGTGACTAACAAATGTAGAGGCTAGCCGCCCAGGCCTTCGCGAACGTGGTAGCTTGCCCATGATCGCACAAGGCAACTCACCAGGCCTCCGCTAATGCGGCTTAGGCCTCACTAATGGGAGATCAATACCATTGGTGATTGTGAACGCGACTAGGAGCCCACAATCGTGAAGAGGAAAATTAGGCTGCACCAGCTTGATGCACATCAGCTGGTTTTGCCCAACTTGAAAATCCCCAATAGGGTTCTCGAGATTCTTTTGAACCCCATGCACACAAAGGATATATGTTACCCCGCCAACTTCGGCATTCCGGACTCAACGGAGGTGTTGGAATTTCAACCGAGATCGTTTCTGACAAAAAGTGGATCCCACACCGAACCCCGTTTAAAGCCAAATTACACAAGGGGGCTCAGGATGAGCCCAAAAGCCTCGGGATCCACACCAAAGATCCTTCTAAACCAAATCATTCCGAAGCTAACGGAACTGTCAGATTGCATTCTAAGGCCGTCTTTCTGAACTTTTGACCGAAGTCGACCGTTTAAGTTTCAAAACCTCCAAAATACAGAAACTTGCACAAAATTTTAAAGAACGACCAAGTGACCGCACTATCAGTCCTAACAGGTCATAAATGTTTTTGGATTGCTATAGGAATTCTCTAAACGACGAAAGGAAGTCAATAACACAAAAAGAAATGACCAGGATGGTCATTACAATATCCACTACCAAAAAGGAAGGCAAGAACACAGAAATGCCTTTTGTCTTTTAATTTTCTCACTCAGATGAAATTATGTTGGTTCACTTGGTTCATTTCCTTTCCTTGTCTCCCTTTCCAGTTTAACATTATTTAATCCTTCAAAATTTTCCTCCTTTGTCCTGATTTTCTTGGATAGCTCTTCATGAAGTCCCTATTCCATATTCATAATGAAGTAGAAACTACACAGATTATTCAGTGGCCATATTATGTATCTTCGTGACTTTGTCCTAATTTTTTATTAGAATCTTTAGGGGGTGCTTTCTAGGACCATGTTCATTGGCTGTAATTTCGTTATTTGGGGGCATTAACTATATACCTGTTCAATGACACCTCCCTGCAAACTTTTCTTCATTTTTTTTAGTATTTTTTTATTGGTGAAACTATTTACCTGTTTAGTGGAACCTTCCTGCTGACTTTTCTTCCCTTTTTGTCATTGAGAATGTAGAGTAGATTGAAACTGAAATTTTTATGCACTGACTTTTGGCAATTTCCCTCCCTAATTCATATGCAGAAAGATGCCACCTTTTATAGTACCTCTCCAATAATACCAACAAAAAATACGTAGTCTTAATTCCTAATATTTTATATCCTGTTCTCTATTTTGAGAGCTTGACATCTTTCGTGTACATTACTGTTCCTTTTGCAGCAACTAGCGACAAAGTCGAACAGTCAAATGTTAGTAAAAAGGAAATAGCTGGCGAAGTTAAAAAAGAATTGGTTTCTGAAGAGCCTACTAGCTCTTCTGCATCAACAGCGAAGGTTAGACGTGATAATATGAAGGATAGAGGTTCTTCTATAAAATCTAGAGGATATCATGGCGTCATGAGCAATGTGGGCAATATGTCTGTATCATCAAATCCTCGCAATGCGGAGAGTAGAATTGCACCTTCAAGATCACAGACTAAACCTCAGAAAATTGTATGCACTGATCAATTAGAAGACAAACTGAACCAGCTAAATCTTGCAATCGTGAGTCAAAACATTTATGTGATTCAAGATGTCAAACATTTAGAATGTCTAATCCGCTGATCTTACTCCAAAAGTTTCACAATGTAGGTTGGCCATGTTGATTCTGGGAAGTCAACACTGTCAGGAAGACTACTACACCTTTTGGGGCAGATATCTCAGAAGGAAATGCACAAATATGAAAAAGAGGCCAAGCAGCAAGTAATCTTTCTGTTCGCTTTTTATCCATTTTGTTAGGACATTGTCAAATCTTGATTAGCTGATTGATACATATCCTATCTATAATCAGGGAAAAGGGTCCTTTGCTTATGCTTGGGCTTTGGATGAGAGTGCTGAGGAAAGAGAGAGAGGAATAACTATGACAGTGGCTGTTGCCTACTTTAACACAAAAAGTTACCGCGTTGTACTGCTTGATTCCCCAGGCCATAGAGACTTTGTCCCAAATATGATATCAGGTGCAACACAAGCGGATGCTGCCATTCTTGTAGTTGATGCTTCAATAGGTGCATTTGAAGCTGGCATTGATGTTAGTGGAGGTCAGACAAGGGAGCATGCACAACTTATCAAAAGCTTTGGGGTGGATCAGATAATAATTGCTATTAACAAAATGGATGTAGTGGGATACTCCAAAGAACGGTTTGATACAATTAAGAATCAACTAGGAACATTTCTCCGGGCTTGTAAGTTTAAAGATTCATTAGTATTGTGGATTCCCCTGAGCGCCATGGAAAACCAAAATTTGGTGACAAGTCCTTCTGATGCAAGATTGTTGTCCTGGTTAGTTTACTGGCAACTGCTAGCGTTACTTGGAAGCATAGTGTGACTCACTGTCTTCAACTTTATCACGTTTGTCGTTTAGAAGAAAATGCTTTCATAGAAGTTTTATGATTGCCTGAGGCAGAACAGTAGAACAGTAGGTTACTTAAAAAAGATATAAGTTAAACTGAATGCAATTGGAAATGAAACATTTAAAGTCTTCTCAAGATTGACAAACCAAATTTGCGAGCTAGTAGATAAAATGATGATTGTGCTGTTGAGTCAAAATTTCTGTGGTAATTTAGTGTCATGCACAAATAGCTCGCGAAGCCCCCATTGTCTTTTGTAGATAATACTGAAGGTTTATTTCAGGTTTCAAGGTCCATGCCTTTTAGACGCCATAGACTCTCTCCAACCTCCCCAGAGAGATTACTCGAAGCCTATATTAATGCCGATATGTGATCTCGTTAAATTACCCTCACAAGGACAGGTGTCAGTATGTGGGAAGTTGGAGACAGGAGCTCTTCAAACTGGAGATAAGGTACTCAATTACCCGCTAATGCAAGAGAGATCCTTCTCCTTTTTTTTTGACCCTCAACATTTAAATTCTTCAAGTATCATATCTAGAACAAGATACTTCTTTATGATATACATGTTTTTAGAGGGCTTGAACTTTTAGAGTAATAACTGTACAGGGAGTTATACCGGTGCCTATAGATCATGTCATCAGTCTGACCATCACCCAGATTTACCTGCCAAAATACCGTGCTGTCATTAGGAGGGGCTGAATGAGGCATTAAGCAACTAAACTTGTATCCTAATTTTCTATCAAGTTGCTACTACATTTTTTTCTCCGAGTGTAACTTTTTTCGTACTGTATATGCTAAAGTATTTTGAATTTTATTTGGGGTGTGTTTGTTTTGAGGGGATGGGAGTTCAAGACAGTTGTTGTTTGAGCTAGGCTTTGCATGGATTGAAACCTGAGGTGGTTTTGATTACTTCAATGTTTTATGTCTTTCTTTCATGTCTTGGAAGGAACATCTGCACATTGACAATAATGAGATAGGTACACGGTGAAACACAAAGACACTTCTTTTTCTCCCTGTTGTGTAAGATACCGTGACTTAGAGTATAAGGGCTCAAGTTAACAGAGTGATAGATATAAAGTGGACTAAGATTACTAACAGATACTTGTGCAGTCATCTTGTTAGGGATTTGTTGGGACATGCTGTTAGGTTATTACTGCAATTGTGATCATAATGCTTGTACAGTGCAGTCATCTAGTGGACAGTAATTATTTAACATTATCAATAAATGCGCCATTGGTGATATTTTTGTTATGTGGATTATTTTTTTTTATTCTACAAGATTTGACCTTGTAACAAGAATGGAAATTCGTTGACTTTTTTTGGAAGGATAATAGTCTTTCCTAACGCTAAATTCTTAACATGGCCAGGTTCTAGTTATTCCATCAAGAGAAATGGCAACTGTGCGTTCTTTGGAACATAATTCTCAGGTTTGTAACAGTGCAAAAGCTGGAGATAATGTCACTGTTAATCTACAAGGTATAGATGTGAATCGTGTAATGGCAGGGGATGTGCTGTGCCACCCTGAATATCCTATTGCTGTTACAAATCATTTGGAACTGAAGATTCTTCTCCTGGATATTGCTGTTCCAATTTTAATTGGGTCTCAGGTAGCAGCTCTTGTCATTTTACATCAAAATTGAGAGTTGCATGACATCTGTTTCTAGCTAATAACTCAAGAGCTCTGAATATTTGAAAATGTGCAGTTGGAATTTCATGTACACCATGTTAAGGAGGCTGCAAGAGTTGTGAGGATTTTGTCCTTGCTTGATCCAAAGACTGGAAAGGAGACCAAGAAATCACCTAGATGTCTTCTAGCAAAGCAGAATGCTATAATTGAGGTTTCTCTCAAGAGCAACTATATGTCTATTGATATGCTTATATTTTATCGTTTTAGTAAATATGTATTAAAAAAATGTCTTTGGTGGGAATGGGTGCAGGGAAGATGCTAGCTATAAAAGAGATCTCAACTTTAATTTGTTTGTCATGGATCAGGTAGTTTTGCAAGGGATAATTTGTGTTGAAGAGCATTCTAAATGTAAGGGTCTTGGAAGGGTGTCCCTCAGAGCATCAGGAAGAACCATCGCTCTTGGTCTTGTGACTAGAGTTCTAGAGAAGAAGGAATAG

Transcript:

CDS:

Protein:

Top hits annotation

Species	Top Hits	E-value	Annotation
Nicotiana tabacum	gene_81652	0	Elongation factor 1-alpha
Nicotiana tabacum	gene_15657	1.00E-26	Elongation factor 1-alpha
Nicotiana tabacum	gene_15658	0	Elongation factor 1-alpha
Nicotiana tabacum	gene_78267	0	Elongation factor 1-alpha
Nicotiana tabacum	gene_85184	1.00E-26	Elongation factor 1-alpha
Nicotiana tabacum	gene_85177	6.00E-105	Elongation factor 1-alpha
Nicotiana tabacum	gene_82513	0	Elongation factor 1-alpha
Nicotiana tabacum	gene_79783	0	Elongation factor 1-alpha
Nicotiana benthamiana(v0.44)	NbS00002332g0006.1	9.00E-114	Elongation factor 1-alpha (AHRD V1 ***- D7DAE6_STAHD)
Nicotiana benthamiana(v0.44)	NbS00033334g0007.1	9.00E-140	Elongation factor 1-alpha (AHRD V1 ***- D7DAE6_STAHD)
Nicotiana benthamiana(v0.44)	NbS00060669g0006.1	0	Elongation factor 1-alpha (AHRD V1 ***- D7DAE6_STAHD)
Nicotiana benthamiana(v0.44)	NbS00008476g0004.1	1.00E-91	Elongation factor 1-alpha (AHRD V1 ***- D7DAE6_STAHD)
Nicotiana benthamiana(v0.44)	NbS00002332g0001.1	2.00E-44	Elongation factor 1-alpha (AHRD V1 ***- D7DAE6_STAHD)
Nicotiana benthamiana(v0.44)	NbS00033334g0006.1	3.00E-28	Elongation factor 1-alpha (AHRD V1 ***- D7DAE6_STAHD)
Solanum tuberosum	PGSC0003DMP400040249	3.00E-76	Oxidoreductase
Solanum tuberosum	PGSC0003DMP400040247	3.00E-76	Gene of unknown function
Solanum tuberosum	PGSC0003DMP400036111	3.00E-76	Gene of unknown function
Solanum tuberosum	PGSC0003DMP400036110	3.00E-76	Gene of unknown function
Solanum tuberosum	PGSC0003DMP400036104	3.00E-76	S-locus lectin protein kinase family protein
Solanum tuberosum	PGSC0003DMP400014282	3.00E-76	Conserved gene of unknown function
Capsicum annuum	Capang03g000657	0
Capsicum annuum	Capang11g001475	1E-77
Capsicum annuum	Capana03g000710	0
Capsicum annuum	Capana03g000388	6.00E-80
Capsicum annuum	CA03g33400	0	AT5G10630 protein
Capsicum annuum	CA06g17790	1.00E-80	EF-1-alpha-related GTP-binding protein
Capsicum annuum	CA03g32990	1.00E-77	EF-1-alpha-related GTP-binding protein
Nicotiana benthamiana(v1.01)	Niben101Scf36506g00004.1	0	Elongation factor 1-alpha
Nicotiana benthamiana(v1.01)	Niben101Scf07591g01029.1	0	Elongation factor 1-alpha-B/C
Nicotiana benthamiana(v1.01)	Niben101Scf14538g00005.1	4.00E-157	Elongation factor 1-alpha 1
Solanum pennellii	Sopen12g016940.1	0	Elongation factor Tu GTP binding domain
Solanum pennellii	Sopen03g038170.2	0	Elongation factor Tu GTP binding domain
Solanum pennellii	Sopen03g038170.1	0	Elongation factor Tu GTP binding domain
Petunia axillaris	Peaxi162Scf00634g00037.1	0	Elongation factor 1-alpha
Petunia axillaris	Peaxi162Scf00683g00036.1	0	Elongation factor 1-alpha
Petunia axillaris	Peaxi162Scf00683g00027.1	4.00E-80	GTP binding Elongation factor Tu family protein
Petunia inflata	Peinf101Scf00904g01017.1	0	Elongation factor 1-alpha
Petunia inflata	Peinf101Scf03038g00067.1	0	Elongation factor 1-alpha
Petunia inflata	Peinf101Scf05363g00071.1	0	Elongation factor 1-alpha

Gene family

Gene family	Subfamily
-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14416	HBS1-like protein		mRNA surveillance pathway	sly03015

PlantCyC

Enzyme ID	Description	Pathway	Pathway id
-	-	-	-

Gene Ontology

GO term	Description	Category
GO:0003924	GTPase activity	molecular_function
GO:0005525	GTP binding	molecular_function

Pfam Domain

Pfam accession	Pfam name	Alignment start	Alignment end
PF00009.23	GTP_EFTU	159	376
PF03144.21	GTP_EFTU_D2	407	470
PF03143.13	GTP_EFTU_D3	481	583

Expression pattern

1. Expression trend for Solyc12g036410.1 global RNA-seq network

2. Expression trend for Solyc12g036410.1 tissue preferential conditional network

3. Expression trend for Solyc12g036410.1 stress differential conditional network

4. Expression trend for Solyc12g036410.1 in different samples during fruit ripening

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