miRNA target function module details

sly-miR164b-5p's network

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Protein:
Yellow color--query protein
Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein
Blue--proteins own interaction and negative co-expression relationship with target protein
Orange--proteins own interaction and protein-protein relationship with target protein

This network produced by cytoscapeweb

Module annotation (GSEA enrichment result)

Function Annotation	FDR	Gene Ontolog
Transcription_related, Transcription factor: NAC	0.002691072	gene family
UDP-D-xylose biosynthesis	0.033551772	plantCyc

miiRNA targets

Gene ID

Expection

Align sequence(miRNA-target)

Annotation

Solyc01g090590.2

ncRNA:	21	ACGUGCACGGGACGAAGAGGU	1
		\|\|\|\|=\|\|\|\|\|\|*\|\|\|\|\|\|=\|\|
targets:	6418	UGCAUGUGCCCAGCUUCUUCA	6438

alpha/beta-Hydrolases superfamily protein

Solyc03g115850.2

ncRNA:	21	ACGUGCACGGGACGAAGAGGU	1
		*\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:	886	GCCACGUGCACUGCUUCUCCA	906

NAC domain containing protein 100

Solyc06g069710.2

ncRNA:	21	ACGUGCACGGGACGAAGAGGU	1
		*\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:	815	GCCACGUGCACUGCUUCUCCA	835

NAC domain containing protein 100

Solyc06g084350.2

2.5

ncRNA:	21	ACGUGCACGGGACGAAGAGGU	1
		\|\|\|\|\|\|\|\|\|\|*\|\|\|=\|\|\|\|
targets:	6	UUCACUUGCCCUACUUUUCCA	26

Small nuclear ribonucleoprotein family protein

Solyc07g062840.2

0.5

ncRNA:	21	ACGUGCACGGGACGAAGAGGU	1
		*\|\|\|\|\|\|\|\|\|\|\|\|=\|\|\|\|\|\|\|
targets:	1639	AGCACGUGCCCUGUUUCUCCA	1659

NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Solyc07g066330.2

ncRNA:	21	ACGUGCACGGGACGAAGAGGU	1
		\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:	4357	AGCAAGUGCCCUGCUUCUCCA	4377

NAC domain containing protein 1

Solyc09g075120.2

2.5

ncRNA:	21	ACGUGCACGGGACGAAGAGGU	1
		*\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|*
targets:	200	CUCGCUUGCCCUGCUUCUCCC	220

UDP-xylose synthase 4

Solyc11g066150.1

1.5

ncRNA:	21	ACGUGCACGGGACGAAGAGGU	1
		*\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:	1675	CUCGCAUGCCCUGCUUCUCCA	1695

UDP-XYL synthase 5

4.Expression profilings

Show details about miRNA target functional module gene expression profiling

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