miRNA target function module details

sly-miR169c's network

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Protein:
Yellow color--query protein
Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein
Blue--proteins own interaction and negative co-expression relationship with target protein
Orange--proteins own interaction and protein-protein relationship with target protein

This network produced by cytoscapeweb

Module annotation (GSEA enrichment result)

Function Annotation	FDR	Gene Ontolog
Transcription_related, Transcription factor: NF-YA	2.99E-10	gene family
eugenol and isoeugenol biosynthesis	0.009298369	plantCyc

miiRNA targets

Gene ID

Expection

Align sequence(miRNA-target)

Annotation

Solyc00g308930.1

2.5

ncRNA:	21	AGCCGUUCAGUAGGAACCGAC	1
		*\|\|=\|\|\|\|\|\|=\|\|\|\|\|=\|\|
targets:	507	GGGGUAAGUCUUUCUUGGUUG	527

Flavin containing amine oxidoreductase family protein

Solyc01g006930.2

2.5

ncRNA:	21	AGCCGUUCAGUAGGAACCGAC	1
		\|\|\|\|\|=\|\|\|\|\|\|\|\|\|\|\|\|*
targets:	5120	UGGGCAGUUCAUCCUUGGCUU	5140

nuclear factor Y, subunit A10

Solyc01g008490.2

ncRNA:	21	AGCCGUUCAGUAGGAACCGAC	1
		=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|*
targets:	4805	GUGGCAAUUCAUCCUUGGCUU	4825

nuclear factor Y, subunit A1

Solyc03g121940.2

ncRNA:	21	AGCCGUUCAGUAGGAACCGAC	1
		=\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|*
targets:	4517	GUGGGAAGUCAUCCUUGGCUA	4537

nuclear factor Y, subunit A3

Solyc05g051140.1

2.5

ncRNA:	21	AGCCGUUCAGUAGGAACCGAC	1
		*\|\|=\|\|\|\|\|\|=\|\|\|\|\|=\|\|
targets:	520	GGGGUAAGUCUUUCUUGGUUG	540

Flavin containing amine oxidoreductase family protein

Solyc08g062210.2

2.5

ncRNA:	21	AGCCGUUCAGUAGGAACCGAC	1
		\|\|\|\|\|\|=\|\|\|\|\|\|\|\|\|\|\|\|
targets:	8866	UCGGCAGUUCAUCCUUGGCUA	8886

nuclear factor Y, subunit A8

Solyc09g075020.2

2.5

ncRNA:	21	AGCCGUUCAGUAGGAACCGAC	1
		=\|\|\|\|\|\|\|\|\|=*\|\|\|\|\|\|\|
targets:	4318	AUGGCAAGUGAUUAUUGGCUG	4338

multidrug resistance-associated protein 4

Solyc10g078390.1

2.5

ncRNA:	21	AGCCGUUCAGUAGGAACCGAC	1
		\|=*\|=\|=\|\|\|\|\|\|\|\|\|\|\|=\|\|
targets:	3385	UUUGUAGGUCAUCCUUGGUUG	3405

CDPK-related kinase 1

4.Expression profilings

Show details about miRNA target functional module gene expression profiling

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