sly-miR6027-5p's network
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Protein:
Yellow color--query protein
Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein
Blue--proteins own interaction and negative co-expression relationship with target protein
Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
protein binding0.014495558GO:0005515

miiRNA targets

Gene IDExpectionAlign sequence(miRNA-target)Annotation
Solyc01g079110.22.5
 ncRNA:22GUAAUUAGGAACACGAUGGGUA1
   ||*|||||=*|||||||==||| 
 targets:369CACUAAUCUGUGUGCUAUUCAU390
Histone superfamily protein
Solyc01g097250.22.5
 ncRNA:22GUAAUUAGGAACACGAUGGGUA1
   |**|=|||||||||=|=|==|| 
 targets:3307CUAUGAUCCUUGUGUUGCUUAU3328
Solyc02g021360.22
 ncRNA:22GUAAUUAGGAACACGAUGGGUA1
   *=||||||=||||*=||||||| 
 targets:2903AGUUAAUCUUUGUUUUACCCAU2924
Transducin/WD40 repeat-like superfamily protein
Solyc03g114140.22.5
 ncRNA:22GUAAUUAGGAACACGAUGGGUA1
   **||=||==||*|||||||||| 
 targets:686GUUUGAUUUUUCUGCUACCCAU707
RNA-dependent RNA polymerase 2
Solyc04g077020.22
 ncRNA:22GUAAUUAGGAACACGAUGGGUA1
   =||||||*=||||||||||=|| 
 targets:1900UAUUAAUGUUUGUGCUACCUAU1921
Tubulin/FtsZ family protein
Solyc08g067090.22.5
 ncRNA:22GUAAUUAGGAACACGAUGGGUA1
   *||*||||||||*||||=|||| 
 targets:6917GAUAAAUCCUUGAGCUAUCCAU6938
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Solyc08g075340.22.5
 ncRNA:22GUAAUUAGGAACACGAUGGGUA1
   ***||||=||||||=|=|==|| 
 targets:4442GUAUAAUUCUUGUGUUGCUUAU4463
xyloglucanase 113
Solyc10g049340.12.5
 ncRNA:22GUAAUUAGGAACACGAUGGGUA1
   =|||=||=||*|||||||=||| 
 targets:297UAUUGAUUCUAGUGCUACUCAU318

4.Expression profilings


Show details about miRNA target functional module gene expression profiling
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Maintained by Jiajie She in Zhen Su's Lab | China Agricultural University
© 2017 All Rights Reserved.
Solyc08g075340.2