miRNA target function module details

sly-miR9479-5p's network

Export

Protein:
Yellow color--query protein
Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein
Blue--proteins own interaction and negative co-expression relationship with target protein
Orange--proteins own interaction and protein-protein relationship with target protein

This network produced by cytoscapeweb

Module annotation (GSEA enrichment result)

Function Annotation	FDR	Gene Ontolog
null	null	-

miiRNA targets

Gene ID

Expection

Align sequence(miRNA-target)

Annotation

Solyc01g095210.2

2.5

ncRNA:	22	ACCUCUUCCCAUCUCCUGACCU	1
		\|\|\|\|\|\|\|\|\|*\|\|\|\|\|\|==\|\|\|=
targets:	4773	UGGAGAAGGCUAGAGGGUUGGG	4794

golgin candidate 4

Solyc01g096480.2

2.5

ncRNA:	22	ACCUCUUCCCAUCUCCUGACCU	1
		\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|=\|\|\|=
targets:	1380	UAGAGAAGGGUAGAGGGAUGGG	1401

Thioredoxin z

Solyc01g109540.2

2.5

ncRNA:	22	ACCUCUUCCCAUCUCCUGACCU	1
		*\|\|\|\|\|\|\|\|\|\|\|\|\|\|*\|\|\|\|
targets:	3128	AAGUGAAGGGUAGAGGAGUGGA	3149

coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative

Solyc03g119200.2

2.5

ncRNA:	22	ACCUCUUCCCAUCUCCUGACCU	1
		*\|\|\|\|\|\|\|\|\|\|\|\|\|\|=\|\|\|*
targets:	3649	AAGAGAAGGGUAUAGGAUUGGU	3670

cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene

Solyc04g005190.2

ncRNA:	22	ACCUCUUCCCAUCUCCUGACCU	1
		\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|=\|\|\|\|=
targets:	2133	UGGAGAAGGGUAGAGGGCUGGG	2154

magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases

Solyc04g050540.2

2.5

ncRNA:	22	ACCUCUUCCCAUCUCCUGACCU	1
		\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:	9870	UGGAGAAGGGUAGACGAGUGGA	9891

plastid transcriptionally active 3

Solyc05g048860.2

ncRNA:	22	ACCUCUUCCCAUCUCCUGACCU	1
		\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|=*\|\|\|\|
targets:	4262	UGGAGAAGGGUAGAGGGGUGGA	4283

RNAhelicase-like 8

Solyc06g007380.1

ncRNA:	22	ACCUCUUCCCAUCUCCUGACCU	1
		\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|=\|\|\|=
targets:	1112	UAGAGAAGGGUCGAGGAUUGGG	1133

methyltransferases

Solyc06g070980.2

1.5

ncRNA:	22	ACCUCUUCCCAUCUCCUGACCU	1
		\|\|\|\|\|=\|\|\|\|\|\|\|\|\|\|=\|\|\|\|=
targets:	594	UGGAGGAGGGUAGAGGGCUGGG	615

ubiquiting-conjugating enzyme 2

Solyc07g055290.2

2.5

ncRNA:	22	ACCUCUUCCCAUCUCCUGACCU	1
		\|\|\|=\|\|\|\|\|\|\|\|\|\|\|\|=*\|\|\|\|
targets:	2775	UGGGGAAGGGUAGAGGGGUGGA	2796

Ras-related small GTP-binding family protein

Solyc08g062770.2

2.5

ncRNA:	22	ACCUCUUCCCAUCUCCUGACCU	1
		**\|\|=\|\|\|\|\|=\|\|\|\|\|\|\|\|\|
targets:	2486	CAAAGGAGGGUGGAGGACUUGA	2507

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Solyc08g078270.2

2.5

ncRNA:	22	ACCUCUUCCCAUCUCCUGACCU	1
		*\|\|\|\|\|\|\|\|=\|\|\|\|==\|\|\|\|
targets:	333	AAGAGAAGGGAGGAGGGUUGGA	354

Phosphotyrosine protein phosphatases superfamily protein

Solyc09g064840.2

1.5

ncRNA:	22	AC-CUCUUCCCAUCUCCUGACCU	1
		\|\|-\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|=\|\|\|*
targets:	6250	UGAGAGAAGGGUAGAGGAUUGGU	6272

Tudor/PWWP/MBT domain-containing protein

Solyc10g005920.2

2.5

ncRNA:	22	ACCUCUUCCCAUCUCCUGACCU	1
		\|\|\|\|\|\|\|\|\|\|\|\|\|\|==\|\|\|=
targets:	5760	UAGUGAAGGGUAGAGGGUUGGG	5781

Transducin/WD40 repeat-like superfamily protein

Solyc11g013280.1

ncRNA:	22	ACCUCUUCCCAUCUCCUGACCU	1
		*\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|=\|\|\|\|=
targets:	65	CGGAGAAGGGUAGAGGGCUGGG	86

transcription activators

4.Expression profilings

Show details about miRNA target functional module gene expression profiling

TOP