Comparison between TreatCFM001015 and TreatCFM001494
| Protein: Yellow color-overlap protein Green color--Module1 member Darkgreen color--Module2 member. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
1.Module annotation (GSEA enrichment result)
| Module ID | Function Annotation | FDR | Gene Ontology |
|---|---|---|---|
| TreatCFM001015 | microtubule-based process | 0.017490904 | GO:0007017 |
| TreatCFM001015 | microtubule | 0.019295309 | GO:0005874 |
| TreatCFM001015 | protein ubiquitination | 0.028188709 | GO:0016567 |
| TreatCFM001015 | Protein_kinases_phosphatases, PPC:4.1.1: MAP3K | 0.016097392 | gene family |
| TreatCFM001015 | Transcription_related, Transcription factor: trihelix | 0.019897428 | gene family |
| TreatCFM001015 | Transcription_related, Transcription factor: SBP | 0.019897428 | gene family |
| TreatCFM001015 | GDP-mannose biosynthesis | 0.009585622 | plantCyc |
| TreatCFM001015 | UTP and CTP de novo biosynthesis | 0.009585622 | plantCyc |
| TreatCFM001015 | L-ascorbate biosynthesis I (L-galactose pathway) | 0.009585622 | plantCyc |
| TreatCFM001015 | Pyrimidine metabolism | 0.027872314 | KEGG |
| TreatCFM001015 | Nicotinate and nicotinamide metabolism | 0.027872314 | KEGG |
| TreatCFM001015 | Biofilm formation - Pseudomonas aeruginosa | 0.018457784 | KEGG |
| TreatCFM001015 | hydrolysis and/or rearrangement of glycosidic bonds， Glycoside Hydrolases： GH89 | 0.032058848 | gene famuly |
| TreatCFM001494 | microtubule-based process | 0.004168098 | GO:0007017 |
| TreatCFM001494 | microtubule | 0.013795459 | GO:0005874 |
| TreatCFM001494 | chromatin binding | 0.015818224 | GO:0003682 |
| TreatCFM001494 | GTPase activity | 0.021312831 | GO:0003924 |
| TreatCFM001494 | Nicotinate and nicotinamide metabolism | 0.007177691 | KEGG |
2.Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast e-value) | Annotation in Arabidopsis |
|---|---|---|
| Solyc04g081490.2 | AT1G75780 (0) | TUB1|tubulin beta-1 chain |
| Solyc01g104530.2 | AT4G08500 (1.00E-103) | MEKK1|MAPK/ERK kinase kinase 1 |
| Solyc03g096730.2 | AT2G39770 (0) | CYT1|CYTOKINESIS DEFECTIVE 1; EMB101|EMBRYO DEFECTIVE 101; GMP1|GDP-MANNOSE PYROPHOSPHORYLASE 1; SOZ1|SENSITIVE TO OZONE 1; VTC1|VITAMIN C DEFECTIVE 1 |
| Solyc05g012040.2 | AT1G69170 (2.00E-43) | SPL6|SQUAMOSA PROMOTER BINDING PROTEIN (SBP)-domain transcription factor 6 |
| Solyc06g073340.2 | AT2G31510 (0) | ARI7|ARIADNE 7; ATARI7|ARABIDOPSIS ARIADNE 7 |
| Solyc08g082170.2 | AT4G23820 (0) | Pectin lyase-like superfamily protein |
| Solyc09g008850.2 | AT3G10030 (7.00E-160) | aspartate/glutamate/uridylate kinase family protein |
| Solyc02g085570.2 | AT4G36690 (0) | ATU2AF65A|U2 snRNP auxilliary factor, large subunit, splicing factor |
| Solyc03g006520.2 | AT4G21660 (0) | proline-rich spliceosome-associated (PSP) family protein |
| Solyc07g065370.2 | AT5G55600 (3.00E-179) | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein |
| Solyc08g061320.2 | AT2G26280 (0) | CID7|CTC-interacting domain 7 |