CFinderADM000328 module
|
Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| alanyl-tRNA aminoacylation | 0.002849905 | GO:0006419 |
| tRNA aminoacylation | 0.005696119 | GO:0043039 |
| alanine-tRNA ligase activity | 0.009400625 | GO:0004813 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 0.009400625 | GO:0016876 |
| ATP binding | 0.009400625 | GO:0005524 |
| nucleic acid binding | 0.01184648 | GO:0003676 |
| helicase activity | 0.028751916 | GO:0004386 |
| nucleotide binding | 0.049823748 | GO:0000166 |
| tRNA charging | 0.010834567 | plantCyc |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g095710.2 | RNA helicase family protein | AT1G33390 (0) |
| Solyc01g097990.2 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | |
| Solyc02g065360.2 | Protein of unknown function, DUF647 | AT2G23470 (4.00E-147) |
| Solyc03g097290.2 | Alanyl-tRNA synthetase | AT1G50200 (0) |
| Solyc05g008930.2 | Protein kinase superfamily protein | AT1G18390 (1.00E-150) |
| Solyc06g075160.2 | SIT4 phosphatase-associated family protein | AT1G07990 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000559 | SOS_response protein insertion into membrane single-stranded DNA binding Lipopolysaccharide_biosynthesis Herpes_simplex_infection | details |
| CFinderADM001034 | protein metabolic process cell redox homeostasis Herpes_simplex_infection | details |
| CFinderADM001204 | microtubule-based process microtubule GTPase activity RNA methyltransferase activity endoplasmic reticulum membrane RNA processing Nicotinate_and_nicotinamide_metabolism | details |
Expression profiles
 Show details about module gene expression profiling |