CFinderADM000369 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| RNA processing | 0.016237496 | GO:0006396 |
| ribonuclease III activity | 0.01998098 | GO:0004525 |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g012540.1 | dicer-like 2 | |
| Solyc02g021130.1 | ||
| Solyc05g051160.1 | AP2/B3-like transcriptional factor family protein | |
| Solyc08g067600.1 | ||
| Solyc09g010750.1 | actin 3 | AT3G53750 (3.00E-73) |
| Solyc09g014670.1 | ||
| Solyc11g019940.1 | ||
| Solyc11g042650.1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000008 | rRNA methylation eukaryotic translation initiation factor 3 complex Transcription factor: M-TYPE tRNA processing | details |
| CFinderADM000102 | E3 adaptor: SKP1 phosphatidylinositol phosphorylation ubiquitin-dependent protein catabolic process histidine biosynthesis phytate degradation I D-myo-inositol (1,4,5)-trisphosphate degradation myo-inositol biosynthesis L-ascorbate biosynthesis I (L-galactose pathway) | details |
| CFinderADM000142 | E3 adaptor: SKP1 ubiquitin-dependent protein catabolic process | details |
| CFinderADM000162 | HTLV-I_infection | details |
| CFinderADM000296 | regulation of transcription from RNA polymerase II promoter Transcription factor: M-TYPE mediator complex RNA_polymerase_II_transcription_cofactor_activity | details |
| CFinderADM000404 | RNA_polymerase_II_transcription_cofactor_activity mediator complex regulation of transcription from RNA polymerase II promoter 3-phosphoinositide biosynthesis D-myo-inositol (1,4,5)-trisphosphate biosynthesis Choline_metabolism_in_cancer | details |
Expression profiles
 Show details about module gene expression profiling |